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BaseInfo

ncRNA ID	novel_osa_miR2449
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:2702297-2702404 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	24
Mature sequence(if miRNA)	85 - AAGAUCGAUCUUCGCAUGCGGCUG - 108
Stem-loop(if miRNA)	--AA                   C  C AC    -        -       GAUC     GAUCGAUCUUCGCAUGCGG UG G  GGCC GCAUGCGC AAAUGGU    U     ||||||||||||||||||| || |  |||| |||||||| |||||||    U     UUAGCUAGAAGUGUACGCC AC C  CCGG CGUACGCG UUUACCA    U CGCC                   A  - GA    G        C       GACG
Stem-loop sequence	AAGAUCGAUCUUCGCAUGCGGCUGCGACGGCCGCAUGCGCAAAUGGUGAUCUUUGCAGACCAUUUCGCGCAUGCGGGCCAGCCAACCGCAUGUGAAGAUCGAUUCCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404285.1	ncRNA:24   GUCGGCGUACGCUUCUAGCUAGAA   1   |**||||*|||||||||||||||| targets:111   CUACCGCUUGCGAAGAUCGAUCUU   134 Target Full Sequence	1.0	Sequence 2410 from Patent EP2074227	NA	coding protein	psRNATarget
JB164746.1	ncRNA:24   GUCGGCGUACGCUUCUAGCUAGAA   1   |**||||*|||||||||||||||| targets:111   CUACCGCUUGCGAAGAUCGAUCUU   134 Target Full Sequence	1.0	Sequence 2410 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236415.1	ncRNA:24   GUCGGCGUACGCUUCUAGCUAGAA   1   |**||||*|||||||||||||||| targets:111   CUACCGCUUGCGAAGAUCGAUCUU   134 Target Full Sequence	1.0	Sequence 2410 from Patent EP2985353	NA	coding protein	psRNATarget
AK288572.1	ncRNA:24   GUCG--GCGUACGCUUCUAGCUAGAA   1   *|||--|||*|||*|||||||||||| targets:2561   AAGCGGCGCCUGCUAAGAUCGAUCUU   2586 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090048G20, full insert sequence	NA	coding protein	psRNATarget