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BaseInfo

ncRNA ID	novel_osa_miR2444
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:4221662-4221777 [-]
Reference genome	IRGSP-1.0
Source	SRR1849774;SRR1849775;SRR2857736;SRR5049789
Length	24
Mature sequence(if miRNA)	93 - AAAAACCAACCUAGUAUCGGAUGU - 116
Stem-loop(if miRNA)	--      C  C    U                UUUAG                    AA   AAAAAC AA CUAG AUCGGAUGUGACACAU     UAUUAUGAAUCUAGAUAUAC  A   |||||| || |||| ||||||||||||||||     ||||||||||||||||||||  C   UUUUUG UU GAUU UAGUCUACGCUGUGUA     AUGAUAUUUAGAUCUGUAUG  U AU      C  A    U                -----                    CU
Stem-loop sequence	AAAAACCAACCUAGUAUCGGAUGUGACACAUUUUAGUAUUAUGAAUCUAGAUAUACAAACUUCGUAUGUCUAGAUUUAUAGUAAUGUGUCGCAUCUGAUUUUAGAUUCGUUUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242632.1	ncRNA:24   UGUAGGCUAUGAUCCAACCAAAAA   1   |||||=|||||||||||||||||| targets:385   ACAUCUGAUACUAGGUUGGUUUUU   408 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090022M05, full insert sequence	NA	coding protein	psRNATarget
AK119339.1	ncRNA:24   UGUAGGCUAUGAUCCAACCAAAAA   1   |||||=|=|||||||||||||||| targets:367   ACAUCUGGUACUAGGUUGGUUUUU   390 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-131-D05, full insert sequence	NA	coding protein	psRNATarget
AK067512.1	ncRNA:24   UGUAGGCUAUGAUCCAACCAAAAA   1   |||||||||*||||*||||||||| targets:3679   ACAUCCGAUCCUAGAUUGGUUUUU   3702 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence	NA	coding protein	psRNATarget
AK071925.1	ncRNA:24   UGUAGGCUAUGAUCCAACCAAAAA   1   *|||||*|||||||*||||||||| targets:1163   UCAUCCAAUACUAGAUUGGUUUUU   1186 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013069L02, full insert sequence	NA	coding protein	psRNATarget
AK099958.1	ncRNA:24   UGUAGGCUAUGAUCCAACCAAAAA   1   *|||||*|||||||*||||||||| targets:1164   UCAUCCAAUACUAGAUUGGUUUUU   1187 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013126A13, full insert sequence	NA	coding protein	psRNATarget