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BaseInfo

ncRNA ID novel_osa_miR2441
Species Oryza sativa
Class miRNA
Genome position Chr1:4729130-4729203 [+]
Reference genome IRGSP-1.0
Source SRR1849774
Length 24
Mature sequence(if miRNA) 1 - UAUUUUGAUUGGAUGGGACACAUC - 24
Stem-loop(if miRNA) --       A          C C     -A   CCAA
  UAUUUUG UUGGAUGGGA A AUCUU  UAU    A
  ||||||| |||||||||| | |||||  |||    U
  AUAAAAC AACCUACUCU U UAGAA  AUG    U
CC       C          C A     CC   AUGC
Stem-loop sequence UAUUUUGAUUGGAUGGGACACAUCUUAUAUCCAAAUUCGUAGUACCAAGAUAUCUCUCAUCCAACCAAAAUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288762.1
ncRNA:24   CUACACAGGGUAGGUUAGUUUUAU   1
  |||||*||*||||||||||||||*
targets:784   GAUGUUUCACAUCCAAUCAAAAUC   807

3.0 Oryza sativa Japonica Group cDNA, clone: J090067F13, full insert sequence NA coding protein psRNATarget