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BaseInfo

ncRNA ID	novel_osa_miR2415
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:13120539-13120723 [-]
Reference genome	IRGSP-1.0
Source	SRR1849773;SRR2097778;SRR2097779;SRR2099567;SRR2099745;SRR2099746;SRR2857730;SRR2857736;SRR3085192;SRR3123651;SRR4407777;SRR4407956;SRR4407957;SRR1738240;SRR1738241
Length	22
Mature sequence(if miRNA)	164 - UCGGCCUCGUGGAUGGACCAGG - 185
Stem-loop(if miRNA)	--   G               AG    -     G           C    U        CAU            CG     -A    U     A   UCG CCUCGUGGAUGGACC  GAGC UCGAC UUCCUUAAGGC GUUC UUCCGACC   ACAAGGUUCCGU  CCUGC  UUGU CCAAG G   ||| |||||||||||||||  |||| ||||| ||||||||||| |||| ||||||||   ||||||||||||  |||||  |||| ||||| U   AGC GGAGCACCUGCCUGG  UUCG AGCUG AAGGAAUUCCG CAAG AAGGCUGG   UGUUCCAAGGUG  GGACG  AGCA GGUUC G GC   A               AU    U     -           U    C        AAU            AA     AA    -     U
Stem-loop sequence	UCGGCCUCGUGGAUGGACCAGGAGCUCGACGUUCCUUAAGGCCGUUCUUUCCGACCCAUACAAGGUUCCGUCGCCUGCAUUGUUCCAAGAGUGUCUUGGACGAAAGCAGGAAGUGGAACCUUGUUAAGGUCGGAACGAACUGCCUUAAGGAAGUCGAUGCUUUAGGUCCGUCCACGAGGACGACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015782959.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   |**|||=|||||||||||||*| targets:1050   CGCGGUUCAUCCACGAGGCCAA   1071 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group L-ascorbate oxidase homolog (LOC4339141), transcript variant X1, mRNA	L-ascorbate oxidase homolog(LOC4339141)	coding protein	psRNATarget
XM_015782960.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   |**|||=|||||||||||||*| targets:1050   CGCGGUUCAUCCACGAGGCCAA   1071 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group L-ascorbate oxidase homolog (LOC4339141), transcript variant X2, mRNA	L-ascorbate oxidase homolog(LOC4339141)	coding protein	psRNATarget
XM_015782961.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   |**|||=|||||||||||||*| targets:1050   CGCGGUUCAUCCACGAGGCCAA   1071 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group L-ascorbate oxidase homolog (LOC4339141), transcript variant X3, mRNA	L-ascorbate oxidase homolog(LOC4339141)	coding protein	psRNATarget
AK105493.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   ***|||*|=||||||||||||| targets:225   GGCGGUACGUCCACGAGGCCGA   246 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-127-C03, full insert sequence	NA	coding protein	psRNATarget
XM_015766171.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   ***|||*|=||||||||||||| targets:230   GGCGGUACGUCCACGAGGCCGA   251 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 2 (LOC4325516), mRNA	NAC domain-containing protein 2(LOC4325516)	coding protein	psRNATarget
JN185443.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   ***|||*|=||||||||||||| targets:119   GGCGGUACGUCCACGAGGCCGA   140 Target Full Sequence	2.0	Oryza sativa Japonica Group NAC transcription factor 14 (NAC14) mRNA, complete cds	NA	coding protein	psRNATarget
XM_015785281.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   ****|||||*|||||||||||| targets:427   AGAAGUCCAACCACGAGGCCGA   448 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group M protein, serotype 5 (LOC4339509), mRNA	M protein, serotype 5(LOC4339509)	coding protein	psRNATarget
AK060333.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   ****|||||*|||||||||||| targets:418   AGAAGUCCAACCACGAGGCCGA   439 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-008-B08, full insert sequence	NA	coding protein	psRNATarget
AK100682.1	ncRNA:22   GGACCAGGUAGGUGCUCCGGCU   1   ****|||||*|||||||||||| targets:419   AGAAGUCCAACCACGAGGCCGA   440 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023113L22, full insert sequence	NA	coding protein	psRNATarget