ncRNA ID | novel_osa_miR2400 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:5100870-5100919 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849773 |
Length | 23 |
Mature sequence(if miRNA) | 28 - UUAAGAGGACCGCACGGAAAAAU - 50 |
Stem-loop(if miRNA) |
--        A       -     A   UUAAGAGG CCGCACG GAAAA U   |||||||| ||||||| ||||| C   AAUUCUCC GGCGUGC CUUUU G UG        A       A     A |
Stem-loop sequence | UUAAGAGGACCGCACGGAAAAAUCGAUUUUCACGUGCGGACCUCUUAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ236172.1 |
|
2.5 | Sequence 2167 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI404042.1 |
|
2.5 | Sequence 2167 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB164503.1 |
|
2.5 | Sequence 2167 from Patent EP2559767 | NA | coding protein | psRNATarget |