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BaseInfo

ncRNA ID	novel_osa_miR2390
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:23901166-23901282 [-]
Reference genome	IRGSP-1.0
Source	SRR1849773;SRR1555746;SRR1555747;SRR2097779;SRR2098557;SRR2098560;SRR2098822;SRR2098823;SRR2099428;SRR2099436;SRR2099745;SRR2099746;SRR1556014;SRR4407779;SRR4407955;SRR4407957;SRR4407959;SRR4407960;SRR4407962;SRR1556020;SRR1654490;SRR1654491;SRR1738210
Length	21
Mature sequence(if miRNA)	1 - UUAGAUGACCAUCAGCAAACA - 21
Stem-loop(if miRNA)	-U       C               C     AUG  U    -AUUG   AAUAAUUGA    GC   UUUGUUG UGGUCAUCUAGCUAC CGUGC   CC GGAG     GAG         CGAU  A   ||||||| ||||||||||||||| |||||   || ||||     |||         ||||   AAACGAC ACCAGUAGAUUGGUG GCACG   GG UCUC     UUC         GCUG  G AC       U               C     ---  U    GGUUA   --------G    AC
Stem-loop sequence	UUUUGUUGCUGGUCAUCUAGCUACCCGUGCAUGCCUGGAGAUUGGAGAAUAAUUGACGAUGCAGCAGUCGGCUUAUUGGCUCUUGGGCACGCGUGGUUAGAUGACCAUCAGCAAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066068.1	ncRNA:21   ACAAACGACUACCAGUAGAUU   1   *|||||||||||*|||||||| targets:335   AGUUUGCUGAUGUUCAUCUAA   355 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013056J05, full insert sequence	NA	coding protein	psRNATarget
XM_015778104.1	ncRNA:21   ACAAACGACUACCAGUAGAUU   1   *|||||||||||*|||||||| targets:234   AGUUUGCUGAUGUUCAUCUAA   254 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group SPX domain-containing membrane protein OsI_17046 (LOC4336724), transcript variant X3, mRNA	SPX domain-containing membrane protein OsI_17046(LOC4336724)	coding protein	psRNATarget
XM_015778102.1	ncRNA:21   ACAAACGACUACCAGUAGAUU   1   *|||||||||||*|||||||| targets:234   AGUUUGCUGAUGUUCAUCUAA   254 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group SPX domain-containing membrane protein OsI_17046 (LOC4336724), transcript variant X1, mRNA	SPX domain-containing membrane protein OsI_17046(LOC4336724)	coding protein	psRNATarget
XM_015778103.1	ncRNA:21   ACAAACGACUACCAGUAGAUU   1   *|||||||||||*|||||||| targets:234   AGUUUGCUGAUGUUCAUCUAA   254 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group SPX domain-containing membrane protein OsI_17046 (LOC4336724), transcript variant X2, mRNA	SPX domain-containing membrane protein OsI_17046(LOC4336724)	coding protein	psRNATarget