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BaseInfo

ncRNA ID novel_osa_miR2376
Species Oryza sativa
Class miRNA
Genome position Chr12:13972009-13972064 [+]
Reference genome IRGSP-1.0
Source SRR1849772;SRR1849784
Length 24
Mature sequence(if miRNA) 1 - AUAACACCAAUCGGGACUAAAGAU - 24
Stem-loop(if miRNA) --A                        G
   UAACACCAAUCGGGACUAAAGAUA C
   ||||||||||||||||||||||||
   AUUGUGGUUGGUCUUGAUUUCUAU A
ACC                        C
Stem-loop sequence AUAACACCAAUCGGGACUAAAGAUAGCACUAUCUUUAGUUCUGGUUGGUGUUACCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288796.1
ncRNA:24   UAGAAAUCAGGGCUAACCACAAUA   1
  |||||||||||||=|||||||||*
targets:1831   AUCUUUAGUCCCGGUUGGUGUUAC   1854

2.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:24   UAGAAAUCAGGGCUAACCACAAUA   1
  |||||||||||||=|||||||||*
targets:148   AUCUUUAGUCCCGGUUGGUGUUAC   171

2.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK288377.1
ncRNA:24   UAGAAAUCAGGGCUAACCACAAUA   1
  |||||||||||||=|||||||||*
targets:1377   AUCUUUAGUCCCGGUUGGUGUUAC   1400

2.5 Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence NA coding protein psRNATarget