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BaseInfo

ncRNA ID novel_osa_miR2369
Species Oryza sativa
Class miRNA
Genome position Chr10:8419074-8419184 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555747;SRR2097778;SRR2098557;SRR2098560;SRR2098822;SRR2098823;SRR1555751;SRR2099745;SRR2099746;SRR1556011;SRR1556014;SRR4407953;SRR4407959;SRR1556018;SRR1556020
Length 24
Mature sequence(if miRNA) 88 - CAAUAUGUAGCAACCUAGGAUGGG - 111
Stem-loop(if miRNA) --          C        AUGGGAC                A   A     UCCC
  CAAUAUGUAG AACCUAGG       UAGACCCAUCCUAGGA UAC AAUGU    U
  |||||||||| ||||||||       |||||||||||||||| ||| |||||    A
  GUUAUACAUC UUGGAUCU       AUUUGGGUAGGAUCCU AUG UUAUA    U
GG          C        ------A                G   C     CCUG
Stem-loop sequence CAAUAUGUAGCAACCUAGGAUGGGACUAGACCCAUCCUAGGAAUACAAAUGUUCCCUAUGUCCAUAUUCGUAGUCCUAGGAUGGGUUUAAUCUAGGUUCCUACAUAUUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015780419.1
ncRNA:24   GGGUAGGAUCCAACGAUGUAUAAC   1
  ===|-|||||||*||||||||||*
targets:2318   UUUA-CCUAGGUGGCUACAUAUUC   2340

2.5 PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g04810, chloroplastic (LOC4337454), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At5g04810, chloroplastic(LOC4337454) coding protein psRNATarget