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BaseInfo

ncRNA ID	novel_osa_miR2364
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:24247726-24247777 [-]
Reference genome	IRGSP-1.0
Source	SRR1849772
Length	22
Mature sequence(if miRNA)	1 - UCCAGAUUCGUAAUAUUAGUAU - 22
Stem-loop(if miRNA)	--U   U  C         A     A    CUA UA UACGAAUCU GACAU C    ||| || ||||||||| |||||    GAU AU AUGCUUAGA CUGUA A UAU   U  A         C     C
Stem-loop sequence	UCUAUUACUACGAAUCUAGACAUACACAUGUCCAGAUUCGUAAUAUUAGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288796.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   *|||||=|||*||||||||||| targets:374   CUACUAGUAUAACGAAUCUGGA   395 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
LQ235678.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*||||||*|||||||||||| targets:152   AUCCUAAUACUACGAAUCUGGA   173 Target Full Sequence	1.5	Sequence 1673 from Patent EP2985353	NA	coding protein	psRNATarget
JB164009.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*||||||*|||||||||||| targets:152   AUCCUAAUACUACGAAUCUGGA   173 Target Full Sequence	1.5	Sequence 1673 from Patent EP2559767	NA	coding protein	psRNATarget
HI403548.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*||||||*|||||||||||| targets:152   AUCCUAAUACUACGAAUCUGGA   173 Target Full Sequence	1.5	Sequence 1673 from Patent EP2074227	NA	coding protein	psRNATarget
AK288418.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*||||||*|||||||||||| targets:887   AUCCUAAUACUACGAAUCUGGA   908 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090031L18, full insert sequence	NA	coding protein	psRNATarget
AK107672.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*|||=||*|||||||||||| targets:878   AUCCUAGUACUACGAAUCUGGA   899 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-131-H10, full insert sequence	NA	coding protein	psRNATarget
AK064924.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*=|||||*|||||||||||| targets:2015   AUCUUAAUACUACGAAUCUGGA   2036 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013000N15, full insert sequence	NA	coding protein	psRNATarget
AK119748.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*=|||||*|||||||||||| targets:2192   AUCUUAAUACUACGAAUCUGGA   2213 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-165-F11, full insert sequence	NA	coding protein	psRNATarget
XM_015785327.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*=|||||*|||||||||||| targets:2248   AUCUUAAUACUACGAAUCUGGA   2269 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group phosphoinositide phospholipase C 2 (LOC4337686), mRNA	phosphoinositide phospholipase C 2(LOC4337686)	coding protein	psRNATarget
AK072141.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*=|||||*|||||||||||| targets:2815   AUCUUAAUACUACGAAUCUGGA   2836 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013122I07, full insert sequence	NA	coding protein	psRNATarget
XM_015786406.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||**|||||||||||=|||||| targets:1939   AUCAUAAUAUUACGAGUCUGGA   1960 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative GDP-L-fucose synthase 2 (LOC4341698), mRNA	putative GDP-L-fucose synthase 2(LOC4341698)	coding protein	psRNATarget
AK288631.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   ||*|||=||*|||||||||||| targets:4124   AUUCUAGUACUACGAAUCUGGA   4145 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090055C12, full insert sequence	NA	coding protein	psRNATarget
XM_015775668.1	ncRNA:22   UAUGAUUAUAAUGCUUAGACCU   1   *|*|||=||*|||||||||||| targets:1586   UUCCUAGUACUACGAAUCUGGA   1607 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RNA pseudouridine synthase 5 (LOC4332490), mRNA	RNA pseudouridine synthase 5(LOC4332490)	coding protein	psRNATarget