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BaseInfo

ncRNA ID	novel_osa_miR2359
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:7513889-7514044 [+]
Reference genome	IRGSP-1.0
Source	SRR1849772;SRR2040395;SRR3123646;SRR1738228
Length	24
Mature sequence(if miRNA)	1 - AAAUCAUGUGGCGCUGAACUUAGA - 24
Stem-loop(if miRNA)	--                                     C  C   -            -C   GUAC    ----   --  G   AAAUCAUGUGGCGCUGAACUUAGACACCUCAGCGCCA AU AGC UGGCGCUGAAUG  CGU    GGCA    GAU  GG A   ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||  |||    ||||    |||  ||   UUUAGUACACCGCGACUUGAAUCUGUGGAGUUGCGGU UA UCG ACCGCGACUUAC  GCA    CCGU    CUG  UC G GA                                     U  -   U            AU   ---A    ACGA   AA  A
Stem-loop sequence	AAAUCAUGUGGCGCUGAACUUAGACACCUCAGCGCCACAUCAGCUGGCGCUGAAUGCCGUGUACGGCAGAUGGGAGACUAAGUCAGCAUGCCAACGUACAUUCAGCGCCAUGCUAUUUGGCGUUGAGGUGUCUAAGUUCAGCGCCACAUGAUUUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK105004.2	ncRNA:24   AGAUUCAAGUCGCGGUGUACUAAA   1   |||||||||*|||||||||||||| targets:397   UCUAAGUUCCGCGCCACAUGAUUU   420 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:24   AGAUUCAAGUCGCGGUGUACUAAA   1   |||||||||*|||||||||||||| targets:1222   UCUAAGUUCCGCGCCACAUGAUUU   1245 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015770638.1	ncRNA:24   AGAUUCAAGUCGCGGUGUACUAAA   1   ||||||||||||||||*||||||| targets:514   UCUAAGUUCAGCGCCAAAUGAUUU   537 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770637.1	ncRNA:24   AGAUUCAAGUCGCGGUGUACUAAA   1   ||||||||||||||||*||||||| targets:514   UCUAAGUUCAGCGCCAAAUGAUUU   537 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015787749.1	ncRNA:24   AGAUUCAAGUCGCGGUGUACUAAA   1   |||||*||||||||||=||||||| targets:58   UCUAAAUUCAGCGCCAUAUGAUUU   81 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At5g39020 (LOC4326071), mRNA	probable receptor-like protein kinase At5g39020(LOC4326071)	coding protein	psRNATarget