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BaseInfo

ncRNA ID	novel_osa_miR2355
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:18075480-18075606 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR2099746;SRR1556014;SRR4407954;SRR4407957;SRR4407961;SRR4407962
Length	24
Mature sequence(if miRNA)	104 - AUAAGUUGAAUUUGAAUUUGCAUG - 127
Stem-loop(if miRNA)	--  UG    A      UU  G   CAAUUU                       CG    UUA   UG  AGUU AAAUUC  CU AUA      GAAACAAAAAUAAUAAAUUUGAC  UGAA   C   ||  |||| ||||||  || |||      |||||||||||||||||||||||  ||||   A   AC  UUAA UUUAAG  GA UAU      CUUUGUUUUUAUUGUUUAAACUG  AUUU   C GU  GU    G      UU  A   AUUCAU                       AU    UUG
Stem-loop sequence	UGUGAGUUAAAAUUCUUCUGAUACAAUUUGAAACAAAAAUAAUAAAUUUGACCGUGAAUUACACGUUUUUAUAGUCAAAUUUGUUAUUUUUGUUUCUACUUAUAUAAGUUGAAUUUGAAUUUGCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK241705.1	ncRNA:24   GUACGUUUAAGUUUAAGUUGAAUA   1   |||||||||||||||||||||||| targets:3001   CAUGCAAAUUCAAAUUCAACUUAU   3024 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J065196L09, full insert sequence	NA	coding protein	psRNATarget
CT834888.1	ncRNA:24   GUACGUUUAAGUUUAAGUUGAAUA   1   ||||||*||||||||||||||||| targets:376   CAUGCAUAUUCAAAUUCAACUUAU   399 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103P09, full insert sequence	NA	coding protein	psRNATarget
AK107231.1	ncRNA:24   GUACGUUUAAGUUUAAGUUGAAUA   1   |||*=||||||||||||||||||| targets:1246   CAUAUAAAUUCAAAUUCAACUUAU   1269 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-125-E04, full insert sequence	NA	coding protein	psRNATarget
CT837957.1	ncRNA:24   GUACGUUUAAGUUUAAGUUGAAUA   1   |||*||||||*||||||=|||||| targets:917   CAUACAAAUUAAAAUUCGACUUAU   940 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122O21, full insert sequence	NA	coding protein	psRNATarget
AK107061.1	ncRNA:24   GUACGUUUAAGUUUAAGUUGAAUA   1   *||*||*|||||||||||||||=| targets:795   AAUACAUAUUCAAAUUCAACUUGU   818 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-121-E01, full insert sequence	NA	coding protein	psRNATarget