ncRNA ID | novel_osa_miR2345 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:27613284-27613358 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849772 |
Length | 24 |
Mature sequence(if miRNA) | 52 - GUAGGAUCGUAAAGGACUUUUCCU - 75 |
Stem-loop(if miRNA) |
--               A       U           C   GUAGGAUCGUAAAGG CUUUUCC CACCUCAAAGG U   ||||||||||||||| ||||||| |||||||||||   UAUCCUAGCAUUUCC GGAAAGG GUGGGGUUUUC A AA               C       -           G |
Stem-loop sequence | GUAGGAUCGUAAAGGACUUUUCCUCACCUCAAAGGCUAGCUUUUGGGGUGGGAAAGGCCCUUUACGAUCCUAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288950.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090083J18, full insert sequence | NA | coding protein | psRNATarget |