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BaseInfo

ncRNA ID	novel_osa_miR2326
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:32927492-32927673 [+]
Reference genome	IRGSP-1.0
Source	SRR1849772;SRR2040380
Length	24
Mature sequence(if miRNA)	159 - AUACGAUUUGGCGCUGAACAAAAG - 182
Stem-loop(if miRNA)	--            -               A  C             CG   U  C   -   C C      U    ---C   C  G   GAGA   UUUGUUCAGCGC AAAUCGUAUGGCGCU AA UUAGACACCUCAG  UCA GU AGC UGG G UGAAUG CGUG    CAC GC GAU    G   |||||||||||| ||||||||||||||| || |||||||||||||  ||| || ||| ||| | |||||| ||||    ||| || |||   AAACAAGUCGCG UUUAGCAUACCGCGA UU AAUCUGUGGAGUC  AGU UA UCG GCC C ACUUAC GUAC    GUG CG CUG    G GA            G               C  A             AU   U  -   U   A A      -    AACC   -  G   AGUC
Stem-loop sequence	UUUGUUCAGCGCAAAUCGUAUGGCGCUAAACUUAGACACCUCAGCGUCAUGUCAGCUGGCGCUGAAUGUCGUGCCACCGCGGAUGAGAGGCUGAGUCGGCGUGCCAACAUGCAUUCAACACCGUGCUAUUUGAUACUGAGGUGUCUAAAUUCAGCGCCAUACGAUUUGGCGCUGAACAAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236294.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=||||||||||||||| targets:81   CUUUUGUUUAGCGCCAAAUCGUAU   104 Target Full Sequence	1.0	Sequence 2289 from Patent EP2985353	NA	coding protein	psRNATarget
HI404164.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=||||||||||||||| targets:81   CUUUUGUUUAGCGCCAAAUCGUAU   104 Target Full Sequence	1.0	Sequence 2289 from Patent EP2074227	NA	coding protein	psRNATarget
JB164625.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=||||||||||||||| targets:81   CUUUUGUUUAGCGCCAAAUCGUAU   104 Target Full Sequence	1.0	Sequence 2289 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015788686.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   =|||||||=||||=|||||||||| targets:1625   UUUUUGUUUAGCGUCAAAUCGUAU   1648 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X2, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015788685.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   =|||||||=||||=|||||||||| targets:1507   UUUUUGUUUAGCGUCAAAUCGUAU   1530 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X1, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015795038.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=|||||||||||*||| targets:2130   CUUUUGUUUAGCGCCAAAUCAUAU   2153 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X3, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795040.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=|||||||||||*||| targets:2110   CUUUUGUUUAGCGCCAAAUCAUAU   2133 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X5, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795039.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=|||||||||||*||| targets:2031   CUUUUGUUUAGCGCCAAAUCAUAU   2054 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X4, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795037.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=|||||||||||*||| targets:1758   CUUUUGUUUAGCGCCAAAUCAUAU   1781 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X1, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795041.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||||=|||||||||||*||| targets:1173   CUUUUGUUUAGCGCCAAAUCAUAU   1196 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X6, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015770637.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||*|||*||||||||||||| targets:369   CUUUUGCUCAACGCCAAAUCGUAU   392 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770638.1	ncRNA:24   GAAAACAAGUCGCGGUUUAGCAUA   1   ||||||*|||*||||||||||||| targets:369   CUUUUGCUCAACGCCAAAUCGUAU   392 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget