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BaseInfo

ncRNA ID	novel_osa_miR2323
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:6514316-6514446 [-]
Reference genome	IRGSP-1.0
Source	SRR1849772
Length	23
Mature sequence(if miRNA)	109 - UUCUUCAUCCGACAAAGUGAUUU - 131
Stem-loop(if miRNA)	--      A                     A             A       UUU     G    U   UUCUUC UCCGACAAAGUGAUUUGCAAG UUGUUCACAAAAU UACAUCU   AUAUA UUUU A   |||||| ||||||||||||||||||||| ||||||||||||| |||||||   ||||| ||||   AAGAAG AGGCUGUUUUACUAAACGUUC AACAAGUGUUUUA AUGUAGA   UAUAU AGAA U UA      A                     C             C       CAU     -    A
Stem-loop sequence	UUCUUCAUCCGACAAAGUGAUUUGCAAGAUUGUUCACAAAAUAUACAUCUUUUAUAUAGUUUUUAUAAAGAUAUAUUACAGAUGUACAUUUUGUGAACAACCUUGCAAAUCAUUUUGUCGGAAGAAGAAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ236694.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:114   CUAUCGCUUUGUUGGAUGAAGAA   136 Target Full Sequence	2.5	Sequence 2689 from Patent EP2985353	NA	coding protein	psRNATarget
JB165025.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:114   CUAUCGCUUUGUUGGAUGAAGAA   136 Target Full Sequence	2.5	Sequence 2689 from Patent EP2559767	NA	coding protein	psRNATarget
HI404564.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:114   CUAUCGCUUUGUUGGAUGAAGAA   136 Target Full Sequence	2.5	Sequence 2689 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015764209.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:15   CUAUCGCUUUGUUGGAUGAAGAA   37 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 3-hydroxyisobutyryl-CoA hydrolase 1 (LOC4351929), transcript variant X7, mRNA	3-hydroxyisobutyryl-CoA hydrolase 1(LOC4351929)	coding protein	psRNATarget
XM_015764210.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:15   CUAUCGCUUUGUUGGAUGAAGAA   37 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 3-hydroxyisobutyryl-CoA hydrolase 1 (LOC4351929), transcript variant X12, mRNA	3-hydroxyisobutyryl-CoA hydrolase 1(LOC4351929)	coding protein	psRNATarget
XM_015764208.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:15   CUAUCGCUUUGUUGGAUGAAGAA   37 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 3-hydroxyisobutyryl-CoA hydrolase 1 (LOC4351929), transcript variant X2, mRNA	3-hydroxyisobutyryl-CoA hydrolase 1(LOC4351929)	coding protein	psRNATarget
XM_015764207.1	ncRNA:23   UUUAGUGAAACAGCCUACUUCUU   1   **|||=||||||=|||||||||| targets:15   CUAUCGCUUUGUUGGAUGAAGAA   37 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 3-hydroxyisobutyryl-CoA hydrolase 1 (LOC4351929), transcript variant X1, mRNA	3-hydroxyisobutyryl-CoA hydrolase 1(LOC4351929)	coding protein	psRNATarget