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BaseInfo

ncRNA ID novel_osa_miR2321
Species Oryza sativa
Class miRNA
Genome position Chr1:10878250-10878330 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014
Length 24
Mature sequence(if miRNA) 58 - UAAAGGAUUUUGAAGGGAUGUGAC - 81
Stem-loop(if miRNA) --         C        C      UAA    CG    
  CACAUCCCU CGAAAUUC UUAUAU   AAGA  GAUGG
  ||||||||| |||||||| ||||||   ||||  ||||A
  GUGUAGGGA GUUUUAGG AAUAUA   UUCU  UUAUG
CA         A        A      UAG    CA    
Stem-loop sequence CACAUCCCUCCGAAAUUCCUUAUAUUAAAAGACGGAUGGAGUAUUACUCUUGAUAUAUAAAGGAUUUUGAAGGGAUGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288214.1
ncRNA:24   CAGUGUAGGGAAGUUUUAGGAAAU   1
  |||=||||||*|||||||||*|||
targets:2454   GUCGCAUCCCAUCAAAAUCCCUUA   2477

2.5 Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence NA coding protein psRNATarget