ncRNA ID | novel_osa_miR2321 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:10878250-10878330 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 24 |
Mature sequence(if miRNA) | 58 - UAAAGGAUUUUGAAGGGAUGUGAC - 81 |
Stem-loop(if miRNA) |
--         C        C      UAA    CG       CACAUCCCU CGAAAUUC UUAUAU   AAGA  GAUGG   ||||||||| |||||||| ||||||   ||||  ||||A   GUGUAGGGA GUUUUAGG AAUAUA   UUCU  UUAUG CA         A        A      UAG    CA     |
Stem-loop sequence | CACAUCCCUCCGAAAUUCCUUAUAUUAAAAGACGGAUGGAGUAUUACUCUUGAUAUAUAAAGGAUUUUGAAGGGAUGUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288214.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence | NA | coding protein | psRNATarget |