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BaseInfo

ncRNA ID	novel_osa_miR2314
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:22648206-22648408 [+]
Reference genome	IRGSP-1.0
Source	SRR1849771;SRR2040395;SRR5049793
Length	24
Mature sequence(if miRNA)	1 - AAACGUAGAUUACUGACAAAACCU - 24
Stem-loop(if miRNA)	--                                      A         A     C                              A  --GAA    UAC   AAACGUAGAUUACUGACAAAACCUAUUCCAUAACCUCU GGCUAUUUU CGAGA GAAUCUAAUGAGGUAUAUUAAUUCAUGAUU GC     UGAU   U   |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||     ||||   G   UUUGCAUCUAAUGACUGUUUUGGGUAAGGUAUUGGGGA CCGAUAAAA GCUCU CUUAGAUUGCUCCAUAUAAUUAGGUACUAA CG     ACUA   U AA                                      A         C     A                              A  AUGUC    CGA
Stem-loop sequence	AAACGUAGAUUACUGACAAAACCUAUUCCAUAACCUCUAGGCUAUUUUACGAGACGAAUCUAAUGAGGUAUAUUAAUUCAUGAUUAGCGAAUGAUUACUGUAGCAUCACUGUAGCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCAUCUCGCAAAAUAGCCAAGGGGUUAUGGAAUGGGUUUUGUCAGUAAUCUACGUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015781418.1	ncRNA:24   UCCAAAACAGUCAUUAGAUGCAAA   1   |||||||*|||||||||||=|||| targets:1306   AGGUUUUAUCAGUAAUCUAUGUUU   1329 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group serine/arginine repetitive matrix protein 1 (LOC4335446), mRNA	serine/arginine repetitive matrix protein 1(LOC4335446)	coding protein	psRNATarget
AK107263.1	ncRNA:24   UCCAAAACAGUCAUUAGAUGCAAA   1   |||||||*|||||||||||=|||| targets:1217   AGGUUUUAUCAGUAAUCUAUGUUU   1240 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-125-H03, full insert sequence	NA	coding protein	psRNATarget
XM_015766387.1	ncRNA:24   UCCAAAACAGUCAUUAGAUGCAAA   1   **|||||||=|*|||||||||||| targets:22   UUGUUUUGUUAUUAAUCUACGUUU   45 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4325753 (LOC4325753), mRNA	uncharacterized LOC4325753(LOC4325753)	coding protein	psRNATarget
AK240978.1	ncRNA:24   UCCAAAACAGUCAUUAGAUGCAAA   1   **|||||||*|||||||||=|||| targets:541   UAGUUUUGUAAGUAAUCUAUGUUU   564 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065048J02, full insert sequence	NA	coding protein	psRNATarget
XM_015762321.1	ncRNA:24   UCCAAAACAGUCAUUAGAUGCAAA   1   =**||||*|||||||||||||||| targets:1110   GAAUUUUAUCAGUAAUCUACGUUU   1133 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group transcription initiation factor TFIID subunit 13 (LOC9268703), mRNA	transcription initiation factor TFIID subunit 13(LOC9268703)	coding protein	psRNATarget