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BaseInfo

ncRNA ID	novel_osa_miR2302
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:6545382-6545501 [+]
Reference genome	IRGSP-1.0
Source	SRR1849771;SRR2040382;SRR2040384;SRR2040387;SRR2040389;SRR2040395;SRR2040400;SRR2040404;SRR2040406;SRR2040408;SRR2040410
Length	24
Mature sequence(if miRNA)	1 - AAAACCGGGACUAAAAAUGAUCUU - 24
Stem-loop(if miRNA)	--AA             A  G        C        AAAACCCC     C   AUAU   C     AACCGGGACUAAA AU AUCUUUAG CCCGGUUG        ACAGC AUU    GAU U     ||||||||||||| || |||||||| ||||||||        ||||| |||    ||| U     UUGGCCCUGAUUU UG UAGAAAUC GGGCCAAC        UGUUG UAG    CUA U UUAC             C  G        A        -----CAU     U   --CC   A
Stem-loop sequence	AAAACCGGGACUAAAAAUGAUCUUUAGCCCCGGUUGAAAACCCCACAGCCAUUAUAUGAUCUUUAAUCCCGAUUGUUGUUACCAACCGGGACUAAAGAUGGUCUUUAGUCCCGGUUCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288405.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   |||||||||||||||||=|||||| targets:2425   AAGAUCAUUUUUAGUCCUGGUUUU   2448 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
XM_015755884.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   ||||||||||||||||||||||** targets:1319   AAGAUCAUUUUUAGUCCCGGUUCA   1342 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group S-norcoclaurine synthase 1 (LOC4346830), mRNA	S-norcoclaurine synthase 1(LOC4346830)	coding protein	psRNATarget
AK288438.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   ||||||||||||||||||||||** targets:1348   AAGAUCAUUUUUAGUCCCGGUUCA   1371 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   |||||**||||||||||||||||| targets:2457   AAGAUGCUUUUUAGUCCCGGUUUU   2480 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288496.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   ||*|||*||||||||||||||||| targets:718   AAAAUCUUUUUUAGUCCCGGUUUU   741 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090040O05, full insert sequence	NA	coding protein	psRNATarget
AK288598.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   ||||||||*|||||*||||||||| targets:1095   AAGAUCAUCUUUAGCCCCGGUUUU   1118 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   ||||||||*|||||*||||||||| targets:84   AAGAUCAUCUUUAGCCCCGGUUUU   107 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
XM_015755979.1	ncRNA:24   UUCUAGUAAAAAUCAGGGCCAAAA   1   ||*|||||*|*||||||||||||* targets:1383   AAAAUCAUCUAUAGUCCCGGUUUC   1406 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group PTI1-like tyrosine-protein kinase At3g15890 (LOC107276656), mRNA	PTI1-like tyrosine-protein kinase At3g15890(LOC107276656)	coding protein	psRNATarget