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BaseInfo

ncRNA ID	novel_osa_miR2292
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:11647734-11647822 [+]
Reference genome	IRGSP-1.0
Source	SRR1849771;SRR2857729;SRR2857731
Length	21
Mature sequence(if miRNA)	1 - AGAGAAUCUGGACUGUUUGGC - 21
Stem-loop(if miRNA)	--       CU  -A            A        -    G AA   AGAGAAU  GG  CUGUUUGGCACA CUUCGGCU CCAG U  G   |||||||  ||  |||||||||||| |||||||| |||| |  U   UCUUUUA  CC  GGUAAACCGUGU GAGGUCGA GGUU A  U UA       UU  AA            C        A    G GG
Stem-loop sequence	AGAGAAUCUGGACUGUUUGGCACAACUUCGGCUCCAGGUAAGUUGGAGUUGGAAGCUGGAGCUGUGCCAAAUGGAACCUUAUUUUCUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015777475.1	ncRNA:21   CGGUUUGUCAGGUCUAAGAGA   1   *|=||||||||||*||||||| targets:1622   UCUAAACAGUCCAAAUUCUCU   1642 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group myosin-12 (LOC4334102), transcript variant X3, mRNA	myosin-12(LOC4334102)	coding protein	psRNATarget
AY374515.1	ncRNA:21   CGGUUUGUCAGGUCUAAGAGA   1   *|=||||||||||*||||||| targets:1789   UCUAAACAGUCCAAAUUCUCU   1809 Target Full Sequence	2.5	Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E1 protein (MyoXIE1) mRNA, complete cds	NA	coding protein	psRNATarget
XM_015777474.1	ncRNA:21   CGGUUUGUCAGGUCUAAGAGA   1   *|=||||||||||*||||||| targets:2022   UCUAAACAGUCCAAAUUCUCU   2042 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group myosin-12 (LOC4334102), transcript variant X2, mRNA	myosin-12(LOC4334102)	coding protein	psRNATarget
AY374517.1	ncRNA:21   CGGUUUGUCAGGUCUAAGAGA   1   *|=||||||||||*||||||| targets:1789   UCUAAACAGUCCAAAUUCUCU   1809 Target Full Sequence	2.5	Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E3 protein (MyoXIE3) mRNA, complete cds	NA	coding protein	psRNATarget
XM_015777473.1	ncRNA:21   CGGUUUGUCAGGUCUAAGAGA   1   *|=||||||||||*||||||| targets:2021   UCUAAACAGUCCAAAUUCUCU   2041 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group myosin-12 (LOC4334102), transcript variant X1, mRNA	myosin-12(LOC4334102)	coding protein	psRNATarget
AY374516.1	ncRNA:21   CGGUUUGUCAGGUCUAAGAGA   1   *|=||||||||||*||||||| targets:1789   UCUAAACAGUCCAAAUUCUCU   1809 Target Full Sequence	2.5	Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E2 protein (MyoXIE2) mRNA, complete cds	NA	coding protein	psRNATarget