ncRNA ID | novel_osa_miR2291 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:18923941-18924024 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849771 |
Length | 24 |
Mature sequence(if miRNA) | 61 - AGUGGGACUCGGAGAUAUCGGACC - 84 |
Stem-loop(if miRNA) |
--           -A     UG CC -  GGGUCCCUUUUAUA   UUCGAUGUCUU  GGUCC  C  G GG              C   |||||||||||  |||||  |  | ||   AGGCUAUAGAG  UCAGG  G  C UC              C CC           GC     GU AA C  UAGUUGACUAGGCG |
Stem-loop sequence | UUCGAUGUCUUAGGUCCUGCCCGGGGGGUCCCUUUUAUACCGCGGAUCAGUUGAUCUCCAAGUGGGACUCGGAGAUAUCGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015793139.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276863 (LOC107276863), mRNA | uncharacterized LOC107276863(LOC107276863) | coding protein | psRNATarget | |||||||||
AK288799.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence | NA | coding protein | psRNATarget |