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BaseInfo

ncRNA ID	novel_osa_miR2283
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:5791588-5791677 [-]
Reference genome	IRGSP-1.0
Source	SRR1849771
Length	24
Mature sequence(if miRNA)	67 - AUUACCAACCAGGACUAAAGAUCU - 90
Stem-loop(if miRNA)	--          A           C  AAUGAU     C   C  AC   AUUACCAACC GGACUAAAGAU UA      CUUUA UCC GG  U   |||||||||| ||||||||||| ||      ||||| ||| ||   UGAUGGUUGG CCUGAUUUCUA AU      GAAAU AGG CC  A UA          C           -  ---GGU     C   C  AA
Stem-loop sequence	AUUACCAACCAGGACUAAAGAUCUAAAUGAUCUUUACUCCCGGACUAAACCCGGACUAAAGUGGUAAUCUUUAGUCCCGGUUGGUAGUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   |||||||||||||*|||||||||* targets:237   AGAUCUUUAGUCCCGGUUGGUAAC   260 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   =||||||||||||*|||||||||* targets:1699   GGAUCUUUAGUCCCGGUUGGUAAC   1722 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
XM_015755256.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   *||||||||||||*|||||||||* targets:142   UGAUCUUUAGUCCCGGUUGGUAAC   165 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget
AK288734.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   *||||||||||||*|||||||||* targets:46   UGAUCUUUAGUCCCGGUUGGUAAC   69 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   |*|||||||||||*|||||||||* targets:2362   AAAUCUUUAGUCCCGGUUGGUAAC   2385 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288598.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   =||-|||||||||*|||||||||* targets:943   GGA-CUUUAGUCCCGGUUGGUAAG   965 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   **||||||||*||*|||||||||| targets:1368   CCAUCUUUAGCCCCGGUUGGUAAU   1391 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK119354.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   |*|**||||*|||||||||||||* targets:64   AAAAAUUUAAUCCUGGUUGGUAAC   87 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015792800.1	ncRNA:24   UCUAGAAAUCAGGACCAACCAUUA   1   |*|**||||*|||||||||||||* targets:673   AAAAAUUUAAUCCUGGUUGGUAAC   696 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA	uncharacterized LOC4346359(LOC4346359)	coding protein	psRNATarget