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BaseInfo

ncRNA ID	novel_osa_miR2282
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:8130992-8131109 [-]
Reference genome	IRGSP-1.0
Source	SRR1849771;SRR1849775;SRR2040409;SRR2040410
Length	24
Mature sequence(if miRNA)	1 - AAAUGCGAGAAAUGUUAGAAUGAC - 24
Stem-loop(if miRNA)	--            A   -A         G                   A   AU  AUG   CAUUCUAGCAUU UCU  UAUUUAUAU GAUGUUAAUGAAUCUAGAU AAU  AU   U   |||||||||||| |||  ||||||||| ||||||||||||||||||| |||  ||   GUAAGAUUGUAA AGA  GUAAAUAUA CUACAAUUACUUAGAUCUA UUA  UA   U CA            -   GC         A                   A   CU  GAU
Stem-loop sequence	CAUUCUAGCAUUAUCUAUAUUUAUAUGGAUGUUAAUGAAUCUAGAUAAAUAUAUAUGUUUAGAUUCAUUAAUCUAGAUUCAUUAACAUCAAUAUAAAUGCGAGAAAUGUUAGAAUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT835116.1	ncRNA:24   CAGUAAGAUUGUAAAGAGCGUAAA   1   |||||||||||||||||||||||* targets:805   GUCAUUCUAACAUUUCUCGCAUUC   828 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA052M05, full insert sequence	NA	coding protein	psRNATarget
AK288390.1	ncRNA:24   CAGUAAGAUUGUAAAGAGCGUAAA   1   |||||||||=||||||||*||||| targets:680   GUCAUUCUAGCAUUUCUCACAUUU   703 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence	NA	coding protein	psRNATarget
XM_015764968.1	ncRNA:24   CAGUAAGAUUGUAAAGAGCGUAAA   1   |||||||||*||||||||*||||| targets:1146   GUCAUUCUAUCAUUUCUCACAUUU   1169 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269766 (LOC9269766), mRNA	uncharacterized LOC9269766(LOC9269766)	coding protein	psRNATarget
XM_015759228.1	ncRNA:24   CAGUAAGAUUGUAAAGAGCGUAAA   1   ||*|||*|||||||||||*||||| targets:2088   GUAAUUGUAACAUUUCUCACAUUU   2111 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group MLO-like protein 9 (LOC4349258), mRNA	MLO-like protein 9(LOC4349258)	coding protein	psRNATarget
AK072272.1	ncRNA:24   CAGUAAGAUUGUAAAGAGCGUAAA   1   ||*|||*|||||||||||*||||| targets:1828   GUAAUUGUAACAUUUCUCACAUUU   1851 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023004C21, full insert sequence	NA	coding protein	psRNATarget