ncRNA ID | novel_osa_miR2269 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:10605671-10605853 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 23 |
Mature sequence(if miRNA) | 1 - ACGGGAAGUAGUUGGUUGGUGGU - 23 |
Stem-loop(if miRNA) |
--A        AG       --G       UUU   A  AUGUGAAAAAGCUAAGUUUCCCAGCGUUUGAUUAAUUUCUAGUUUAUUUUCUAUA    CGGGAAGU  UUGGUUG   UGGUCAA   CUG GA                                                       U    ||||||||  |||||||   |||||||   ||| ||                                                       U    GCCCUUCG  GAUCGAC   AUCAAAG   AGA GU                                                       A CAA        AA       UAU       ---   -  AUUAAUUUUCCAGGGGAUUUAUUAUAUCGAAACUAAGAUUUUUUGACAUCAAUAA |
Stem-loop sequence | ACGGGAAGUAGUUGGUUGGUGGUCAAUUUCUGAGAAUGUGAAAAAGCUAAGUUUCCCAGCGUUUGAUUAAUUUCUAGUUUAUUUUCUAUAUUAAAUAACUACAGUUUUUUAGAAUCAAAGCUAUAUUAUUUAGGGGACCUUUUAAUUAUGAGAGAAACUAUAUCAGCUAGAAGCUUCCCGAAC |