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BaseInfo

ncRNA ID	novel_osa_miR2267
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:31755469-31755630 [+]
Reference genome	IRGSP-1.0
Source	SRR1849771;SRR1849778;SRR1849781;SRR1849784;SRR2040384;SRR2040387;SRR2040391;SRR2040402;SRR2040403;SRR2040408;SRR2040410
Length	21
Mature sequence(if miRNA)	142 - UCAAGAACCGUAGAAUUGCUC - 162
Stem-loop(if miRNA)	--             C      A                  --UU   UC   UGU              U      C   GU   GCAAUUUUACGGU CUUGAG AGGUACCAUGAGGUACCA    UUU  UAU   AAAUUUGGUACCUC UGAUAC UCG  A   ||||||||||||| |||||| ||||||||||||||||||    |||  |||   |||||||||||||| |||||| |||   CGUUAAGAUGCCA GAACUC UCUAUGGUACUCCAUGGU    AAA  AUA   UUUAAACUAUGGAG ACUAUG AGU  C CU             A      A                  UUUU   UC   --U              U      A   AU
Stem-loop sequence	GCAAUUUUACGGUCCUUGAGAAGGUACCAUGAGGUACCAUUUUUUCUAUUGUAAAUUUGGUACCUCUUGAUACCUCGGUACUAUGAAGUAUCAUGAGGUAUCAAAUUUUAUACUAAAUUUUUGGUACCUCAUGGUAUCUACUCAAGAACCGUAGAAUUGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066407.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   ||||||||=|||||||||||| targets:3813   GAGCAAUUUUACGGUUCUUGA   3833 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013063J08, full insert sequence	NA	coding protein	psRNATarget
AK288954.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   ||||||||=|||||||||||| targets:3532   GAGCAAUUUUACGGUUCUUGA   3552 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090083O05, full insert sequence	NA	coding protein	psRNATarget
XM_015789833.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   |||||||||||||||||||*| targets:3209   GAGCAAUUCUACGGUUCUUAA   3229 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC4324067), mRNA	receptor-like protein 12(LOC4324067)	coding protein	psRNATarget
XM_015786027.1	ncRNA:21   CUCGUUAAGAUGCCAAGAACU   1   *||||||||||||||*||||| targets:4597   AAGCAAUUCUACGGUCCUUGA   4617 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group ABC transporter C family member 8 (LOC9267441), mRNA	ABC transporter C family member 8(LOC9267441)	coding protein	psRNATarget