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BaseInfo

ncRNA ID	novel_osa_miR2256
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:8885250-8885345 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556011;SRR1556014
Length	24
Mature sequence(if miRNA)	73 - AAAUAAAUGUAGGCAAUGCUAGAA - 96
Stem-loop(if miRNA)	--A          C     C              A      GA  CAU    UAGUAUUGCC ACAUU AUUUAGAUGUUAAU AAUCUA  CA   A    |||||||||| ||||| |||||||||||||| ||||||  ||    AUCGUAACGG UGUAA UAAAUCUACAAUUA UUAGAU  GU   C AAG          A     A              C      AC  AUA
Stem-loop sequence	AUAGUAUUGCCCACAUUCAUUUAGAUGUUAAUAAAUCUAGACACAUACAUAUGCAUAGAUUCAUUAACAUCUAAAUAAAUGUAGGCAAUGCUAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015758512.1	ncRNA:24   AAGAUCGUAACGGAUGUAAAUAAA   1   ||||||||||||||||||||||*| targets:1446   UUCUAGCAUUGCCUACAUUUAUAU   1469 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group BTB/POZ and MATH domain-containing protein 1-like (LOC107279175), mRNA	BTB/POZ and MATH domain-containing protein 1-like(LOC107279175)	coding protein	psRNATarget
XM_015795948.1	ncRNA:24   AAGAUCGUAACGGAUGUAAAUAAA   1   |||||*||||||||||||||||*| targets:1012   UUCUAUCAUUGCCUACAUUUAUAU   1035 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L18a-like protein (LOC4326318), mRNA	60S ribosomal protein L18a-like protein(LOC4326318)	coding protein	psRNATarget
AK287948.1	ncRNA:24   AAGAUCGUAACGGAUGUAAAUAAA   1   |||||*||||||||||||||||*| targets:862   UUCUAUCAUUGCCUACAUUUAUAU   885 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075028D01, full insert sequence	NA	coding protein	psRNATarget
XM_015774190.1	ncRNA:24   AAGAUCGUAACGGAUGUAAAUAAA   1   ||*|||||||*||||||||*|||| targets:1398   UUAUAGCAUUUCCUACAUUCAUUU   1421 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group IAA-amino acid hydrolase ILR1-like 4 (LOC4334708), mRNA	IAA-amino acid hydrolase ILR1-like 4(LOC4334708)	coding protein	psRNATarget
CT833422.1	ncRNA:24   AAGAUCGUAACGGAUGUAAAUAAA   1   ||*|||||||*||||||||*|||| targets:144   UUAUAGCAUUUCCUACAUUCAUUU   167 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA030N21, full insert sequence	NA	coding protein	psRNATarget