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BaseInfo

ncRNA ID	novel_osa_miR2253
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:6318342-6318439 [+]
Reference genome	IRGSP-1.0
Source	SRR1849770
Length	24
Mature sequence(if miRNA)	75 - UUUGGAUGAUAUAUUUGCCUGCCU - 98
Stem-loop(if miRNA)	--C       U           C     C  C       -----------        UAGGCAA UGUAUCGUCUA GUCGG GU GUUCAAG           GCUGC    ||||||| ||||||||||| ||||| || |||||||           ||||A    GUCCGUU AUAUAGUAGGU UAGUC CG UAGGUUC           UGACU UCC       U           U     U  U       UCCAGCUUACA
Stem-loop sequence	CUAGGCAAUUGUAUCGUCUACGUCGGCGUCGUUCAAGGCUGCAUCAGUACAUUCGACCUCUUGGAUUGCUCUGAUUUGGAUGAUAUAUUUGCCUGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288885.1	ncRNA:24   UCCGUCCGUUUAUAUAGUAGGUUU   1   |||=|||||||||||||||||||| targets:3580   AGGUAGGCAAAUAUAUCAUCCAAA   3603 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090079K20, full insert sequence	NA	coding protein	psRNATarget
AK289121.1	ncRNA:24   UCCGUCCGUUUAUAUAGUAGGUUU   1   |||=|||||||||||||||||||| targets:2438   AGGUAGGCAAAUAUAUCAUCCAAA   2461 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090097J21, full insert sequence	NA	coding protein	psRNATarget
AK288391.1	ncRNA:24   UCCGUCCGUUUAUAUAGUAGGUUU   1   |||=|||||||||||||||||||| targets:789   AGGUAGGCAAAUAUAUCAUCCAAA   812 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090027H03, full insert sequence	NA	coding protein	psRNATarget
AK288795.1	ncRNA:24   UCCGUCCGUUUAUAUAGUAGGUUU   1   |||=||*||||||||||||||||| targets:3578   AGGUAGACAAAUAUAUCAUCCAAA   3601 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090070D09, full insert sequence	NA	coding protein	psRNATarget