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BaseInfo

ncRNA ID novel_osa_miR2247
Species Oryza sativa
Class miRNA
Genome position Chr8:24487139-24487202 [+]
Reference genome IRGSP-1.0
Source SRR1849770
Length 24
Mature sequence(if miRNA) 1 - AUACCUUGAGUACCGGAUCGGAUA - 24
Stem-loop(if miRNA) --    - U  A   C            C  G
  AUAC C UG GUA CGGAUCGGAUAC CG G
  |||| | || ||| |||||||||||| || U
  UAUG G AU CAU GUCUAGUCUAUG GC A
GC    A U  C   A            A  U
Stem-loop sequence AUACCUUGAGUACCGGAUCGGAUACCCGGGUAUCGAGUAUCUGAUCUGAUACCUAUGAGUAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289014.1
ncRNA:24   AUAGGCUAGGCCAUGAGUUCCAUA   1
  ||||||||||||||||||||||||
targets:299   UAUCCGAUCCGGUACUCAAGGUAU   322

0.0 Oryza sativa Japonica Group cDNA, clone: J090089J15, full insert sequence NA coding protein psRNATarget