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BaseInfo

ncRNA ID	novel_osa_miR2245
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:13363260-13363365 [+]
Reference genome	IRGSP-1.0
Source	SRR1849770;SRR1738237
Length	20
Mature sequence(if miRNA)	1 - GUCUCAUAAAAUACCAACCU - 20
Stem-loop(if miRNA)	--G                          A               -GUA  AC    UCUCAUAAAAUACCAACCUAGUACUG AUGUGACGCAUCUUA    CA  G    |||||||||||||||||||||||||| |||||||||||||||    ||  A    AGAGUAUUUUAUGGUUGGAUCAUGAC UACACUGUGUAGAAU    GU  A GGG                          C               AUAA  CU
Stem-loop sequence	GUCUCAUAAAAUACCAACCUAGUACUGAAUGUGACGCAUCUUAGUACAACGAAUCUGAAUAUAAGAUGUGUCACAUCCAGUACUAGGUUGGUAUUUUAUGAGAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242632.1	ncRNA:20   UCCAACCAUAAAAUACUCUG   1   ||||||||*||||||||||| targets:397   AGGUUGGUUUUUUAUGAGAC   416 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090022M05, full insert sequence	NA	coding protein	psRNATarget
KC511028.1	ncRNA:20   UCCAACCAUAAAAUACUCUG   1   *|*||||||||||||||||* targets:709   UGCUUGGUAUUUUAUGAGAA   728 Target Full Sequence	2.0	Oryza sativa Indica Group cultivar KDML105 terpene synthase mRNA, partial cds	NA	coding protein	psRNATarget
KC511029.1	ncRNA:20   UCCAACCAUAAAAUACUCUG   1   *|*||||||||||||||||* targets:703   UGCUUGGUAUUUUAUGAGAA   722 Target Full Sequence	2.0	Oryza sativa Indica Group cultivar IL162 terpene synthase mRNA, complete cds	NA	coding protein	psRNATarget
KC511027.1	ncRNA:20   UCCAACCAUAAAAUACUCUG   1   *|*||||||||||||||||* targets:703   UGCUUGGUAUUUUAUGAGAA   722 Target Full Sequence	2.0	Oryza sativa Indica Group cultivar Rathu Heenati terpene synthase mRNA, complete cds	NA	coding protein	psRNATarget
XM_015779828.1	ncRNA:20   UCCAACCAUAAAAUACUCUG   1   *|*||||||||||||||||* targets:724   UGCUUGGUAUUUUAUGAGAA   743 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group (+)-germacrene D synthase-like (LOC107280712), mRNA	(+)-germacrene D synthase-like(LOC107280712)	coding protein	psRNATarget