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BaseInfo

ncRNA ID novel_osa_miR2244
Species Oryza sativa
Class miRNA
Genome position Chr8:9886681-9886731 [+]
Reference genome IRGSP-1.0
Source SRR1849770
Length 24
Mature sequence(if miRNA) 28 - GAUCUUUAGUAUCGGUUGGUAACA - 51
Stem-loop(if miRNA) --          GG          C
  UUACUAACCG  ACUAAAGAUC C
  ||||||||||  |||||||||| G
  AAUGGUUGGC  UGAUUUCUAG A
AC          UA          U
Stem-loop sequence UUACUAACCGGGACUAAAGAUCCCGAUGAUCUUUAGUAUCGGUUGGUAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289098.1
ncRNA:24   ACAA------UGGUUGGCUAUGAUUUCUAG   1
  *|||------||||||||=||||||||||=
targets:251   GGUUGGUAACACCAACCGGUACUAAAGAUU   280

2.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget