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BaseInfo

ncRNA ID	novel_osa_miR2230
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:15941477-15941576 [-]
Reference genome	IRGSP-1.0
Source	SRR1849770;SRR1849774;SRR2040386
Length	24
Mature sequence(if miRNA)	77 - AUAAGAGAUUUUAAACGGAUGGGA - 100
Stem-loop(if miRNA)	--AUA         AA                        A  ----AA  U      AGAGAUUUU  ACGGAUGGGAUACUUCCUAGCACA CG      UC A      |||||||||  |||||||||||||||||||||||| ||      ||      UCUCUAAAA  UGCCUACUCUGUGAAGGAUCGUGU GC      AG G UAUAA         CC                        C  CUACCG  A
Stem-loop sequence	AUAAGAGAUUUUAAACGGAUGGGAUACUUCCUAGCACAACGAAUCUAGAGAGCCAUCCGCUGUGCUAGGAAGUGUCUCAUCCGUCCAAAAUCUCUAAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288305.1	ncRNA:24   AGGGUAGGCAAAUUUUAGAGAAUA   1   ||=|||||||*||||||||||||| targets:1050   UCUCAUCCGUCUAAAAUCUCUUAU   1073 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget
AK288305.1	ncRNA:24   AGGGUAGGCAAAUUUUAGAGAAUA   1   ||=|||||||*||||||||||||| targets:1381   UCUCAUCCGUCUAAAAUCUCUUAU   1404 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090020F20, full insert sequence	NA	coding protein	psRNATarget
AK120979.1	ncRNA:24   AGGGUAGGCAAAUUUUAGAGAAUA   1   ||*|||==*||||||||||||||| targets:2100   UCACAUUUCUUUAAAAUCUCUUAU   2123 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023041P05, full insert sequence	NA	coding protein	psRNATarget
XM_015794062.1	ncRNA:24   AGGGUAGGCAAAUUUUAGAGAAUA   1   ||*=||=|*|*||||||||||||| targets:1100   UCAUAUUCUUCUAAAAUCUCUUAU   1123 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group transcription factor AIG1 (LOC4345836), mRNA	transcription factor AIG1(LOC4345836)	coding protein	psRNATarget
AK107726.1	ncRNA:24   AGGGUAGGCAAAUUUUAGAGAAUA   1   ||*=||=|*|*||||||||||||| targets:502   UCAUAUUCUUCUAAAAUCUCUUAU   525 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-132-F02, full insert sequence	NA	coding protein	psRNATarget