ncRNA ID | novel_osa_miR2225 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:15497031-15497137 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849770 |
Length | 23 |
Mature sequence(if miRNA) | 85 - CGUCACAGAUGAGUGUCAUCGGU - 107 |
Stem-loop(if miRNA) |
--       C       C        UC  U  C                AUGC   CGAUGAC CUCAUCU UGACGGGC  GG GU UGGGCCCGAUUGAGAU    G   ||||||| ||||||| ||||||||  || || ||||||||||||||||   GCUACUG GAGUAGA ACUGCUCG  UC UA AUCCGGGCUAACUCUA    A UG       U       C        UU  -  A                CUGG |
Stem-loop sequence | CGAUGACCCUCAUCUCUGACGGGCUCGGUGUCUGGGCCCGAUUGAGAUAUGCGAGGUCAUCUCAAUCGGGCCUAAAUCUUUGCUCGUCACAGAUGAGUGUCAUCGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288447.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence | NA | coding protein | psRNATarget |