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BaseInfo

ncRNA ID	novel_osa_miR2221
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:14390411-14390468 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	21
Mature sequence(if miRNA)	38 - AGGCGGCAGCGAGGACGGUGG - 58
Stem-loop(if miRNA)	--A     C  C    A      UU   C    GGCGG AG GAGG CGGUGG  UGC C    ||||| || |||| ||||||  ||| C    CCGCC UC CUCC GCUACC  GCG G GCC     -  C    A      UC   C
Stem-loop sequence	AGGCGGCAGCGAGGACGGUGGUUUGCCCCGCGCGCUCCAUCGACCUCCCUCCGCCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015782467.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   ||=||||||||||*||||||| targets:1102   CCGCCGUCCUCGCCGCCGCCU   1122 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 48-like (LOC4338814), mRNA	NAC domain-containing protein 48-like(LOC4338814)	coding protein	psRNATarget
XM_015772148.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   |==||||||||||*||||||| targets:990   CUGCCGUCCUCGCCGCCGCCU   1010 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270817 (LOC9270817), transcript variant X1, mRNA	uncharacterized LOC9270817(LOC9270817)	coding protein	psRNATarget
AK242395.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   =||=|||||||||*||||||| targets:46   UCAUCGUCCUCGCCGCCGCCU   66 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J080064M09, full insert sequence	NA	coding protein	psRNATarget
XM_015758531.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   *|=||||||||||*||||||| targets:1048   GCGCCGUCCUCGCCGCCGCCU   1068 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group QWRF motif-containing protein 7 (LOC4349342), mRNA	QWRF motif-containing protein 7(LOC4349342)	coding protein	psRNATarget
AK120846.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   *|=||||||||||*||||||| targets:918   GCGCCGUCCUCGCCGCCGCCU   938 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023022N01, full insert sequence	NA	coding protein	psRNATarget
CT834073.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   *|=||||||||||*||||||| targets:917   GCGCCGUCCUCGCCGCCGCCU   937 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121B15, full insert sequence	NA	coding protein	psRNATarget
AK059811.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   *|=||||||||||*||||||| targets:269   GCGCCGUCCUCGCCGCCGCCU   289 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015784630.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   *|||||*|||||||||||||* targets:820   GCACCGGCCUCGCUGCCGCCG   840 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group formin-like protein 5 (LOC9266334), mRNA	formin-like protein 5(LOC9266334)	coding protein	psRNATarget
AK120770.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   *|||||*|||||||||||||* targets:602   GCACCGGCCUCGCUGCCGCCG   622 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023008H10, full insert sequence	NA	coding protein	psRNATarget
XM_015785287.1	ncRNA:21   GGUGGCAGGAGCGACGGCGGA   1   =*=|||||*|||||||||||| targets:2627   UGGCCGUCAUCGCUGCCGCCU   2647 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339807 (LOC4339807), mRNA	uncharacterized LOC4339807(LOC4339807)	coding protein	psRNATarget