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BaseInfo

ncRNA ID	novel_osa_miR2185
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:4221666-4221773 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR2099568;SRR1556014;SRR4407958
Length	24
Mature sequence(if miRNA)	85 - ACCAACCUAGUAUCGGAUGUGACA - 108
Stem-loop(if miRNA)	--ACCAAC    U                UUUAG                    AA         CUAG AUCGGAUGUGACACAU     UAUUAUGAAUCUAGAUAUAC  A         |||| ||||||||||||||||     ||||||||||||||||||||  C         GAUU UAGUCUACGCUGUGUA     AUGAUAUUUAGAUCUGUAUG  U UUUGCUUA    U                -----                    CU
Stem-loop sequence	ACCAACCUAGUAUCGGAUGUGACACAUUUUAGUAUUAUGAAUCUAGAUAUACAAACUUCGUAUGUCUAGAUUUAUAGUAAUGUGUCGCAUCUGAUUUUAGAUUCGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK119339.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   |||||||||=|=|||||||||||| targets:363   UGUCACAUCUGGUACUAGGUUGGU   386 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-131-D05, full insert sequence	NA	coding protein	psRNATarget
AK242632.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   |*|||||||=|||||||||||||| targets:381   UAUCACAUCUGAUACUAGGUUGGU   404 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090022M05, full insert sequence	NA	coding protein	psRNATarget
LQ236093.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   ||||*||||=||||||||||||*| targets:100   UGUCCCAUCUGAUACUAGGUUGCU   123 Target Full Sequence	2.5	Sequence 2088 from Patent EP2985353	NA	coding protein	psRNATarget
HI403963.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   ||||*||||=||||||||||||*| targets:100   UGUCCCAUCUGAUACUAGGUUGCU   123 Target Full Sequence	2.5	Sequence 2088 from Patent EP2074227	NA	coding protein	psRNATarget
JB164424.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   ||||*||||=||||||||||||*| targets:100   UGUCCCAUCUGAUACUAGGUUGCU   123 Target Full Sequence	2.5	Sequence 2088 from Patent EP2559767	NA	coding protein	psRNATarget
AK068076.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   *||-=||||||*|||||||||||* targets:873   GGU-GCAUCCGCUACUAGGUUGGC   895 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013132D03, full insert sequence	NA	coding protein	psRNATarget
AK067441.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   *||-=||||||*|||||||||||* targets:1398   GGU-GCAUCCGCUACUAGGUUGGC   1420 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013100E18, full insert sequence	NA	coding protein	psRNATarget
XM_015781222.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   *||-=||||||*|||||||||||* targets:1415   GGU-GCAUCCGCUACUAGGUUGGC   1437 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative glucuronosyltransferase PGSIP8 (LOC4336612), mRNA	putative glucuronosyltransferase PGSIP8(LOC4336612)	coding protein	psRNATarget
AK070954.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   *||-=||||||*|||||||||||* targets:2206   GGU-GCAUCCGCUACUAGGUUGGC   2228 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023072I01, full insert sequence	NA	coding protein	psRNATarget
AK071925.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   *||=*|||||*|||||||*||||| targets:1159   AGUUUCAUCCAAUACUAGAUUGGU   1182 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013069L02, full insert sequence	NA	coding protein	psRNATarget
AK099958.1	ncRNA:24   ACAGUGUAGGCUAUGAUCCAACCA   1   *||=*|||||*|||||||*||||| targets:1160   AGUUUCAUCCAAUACUAGAUUGGU   1183 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013126A13, full insert sequence	NA	coding protein	psRNATarget