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BaseInfo

ncRNA ID	novel_osa_miR2182
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:26953627-26953713 [-]
Reference genome	IRGSP-1.0
Source	SRR1849769;SRR2040401;SRR3123650;SRR1738239;SRR1738241
Length	21
Mature sequence(if miRNA)	67 - CUGGCGCUGAACUUAGACACC - 87
Stem-loop(if miRNA)	---C                             U  CAUAUUC   G     UGGCGCUGAACUUAGACACCUCAGCGCCA GU       AGC C     ||||||||||||||||||||||||||||| ||       ||| C     ACCGCGACUUGAAUCUGUGGAGUCGCGGU UA       UCG A GGGA                             U  -------   U
Stem-loop sequence	CUGGCGCUGAACUUAGACACCUCAGCGCCAUGUCAUAUUCAGCGCCAUGCUAUUUGGCGCUGAGGUGUCUAAGUUCAGCGCCAAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT837884.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   ||||||||||||||||||||* targets:938   GGUGUCUAAGUUCAGCGCCAA   958 Target Full Sequence	1.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058P19, full insert sequence	NA	coding protein	psRNATarget
XM_015770638.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   ||||||||||||||||||||* targets:510   GGUGUCUAAGUUCAGCGCCAA   530 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
XM_015770637.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   ||||||||||||||||||||* targets:510   GGUGUCUAAGUUCAGCGCCAA   530 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA	uncharacterized LOC4329649(LOC4329649)	coding protein	psRNATarget
AK241139.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   ||||||||||||||||||||* targets:933   GGUGUCUAAGUUCAGCGCCAA   953 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J065099H13, full insert sequence	NA	coding protein	psRNATarget
AK105004.2	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   |||||||||||||*||||||* targets:393   GGUGUCUAAGUUCCGCGCCAC   413 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   |||||||||||||*||||||* targets:1218   GGUGUCUAAGUUCCGCGCCAC   1238 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015788685.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   |||||||||*||||||||||* targets:1649   GGUGUCUAAUUUCAGCGCCAU   1669 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X1, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015788686.1	ncRNA:21   CCACAGAUUCAAGUCGCGGUC   1   |||||||||*||||||||||* targets:1767   GGUGUCUAAUUUCAGCGCCAU   1787 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X2, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget