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BaseInfo

ncRNA ID novel_osa_miR2176
Species Oryza sativa
Class miRNA
Genome position Chr6:16106212-16106430 [-]
Reference genome IRGSP-1.0
Source SRR1849769;SRR5049788
Length 24
Mature sequence(if miRNA) 196 - AUGCAGCGGUAUGAAUGAAAUGAC - 219
Stem-loop(if miRNA) --   C              A                         C                   AAA     U   UGUUUUU   C  --   -       -UUUA  A
  AUG AGCGGUAUGAAUGA AUGACCAUUCUACCCUUAUAUACCA AUGGAAAAGAAAGAAAAAA   GAAUA AAA       ACA GU  GUA UGAUCGU     GA U
  ||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||   ||||| |||       ||| ||  ||| |||||||     ||
  UAC UCGCCAUACUUACU UACUGGUGAGAUGGGAAUAUAUGGU UAUUUUUUCUUUCUUUUUU   UUUAU UUU       UGU CG  CGU GUUAGCA     CU U
CG   A              C                         A                   GUG     C   -UUUUAU   C  GU   C       UUCAA  G
Stem-loop sequence AUGCAGCGGUAUGAAUGAAAUGACCAUUCUACCCUUAUAUACCACAUGGAAAAGAAAGAAAAAAAAAGAAUAUAAAUGUUUUUACACGUGUAUGAUCGUUUUAGAAUUGUCAACUUACGAUUGCUGCUGGCCUGUUAUUUUUUUCUAUUUGUGUUUUUUCUUUCUUUUUUAUAUGGUAUAUAAGGGUAGAGUGGUCAUCUCAUUCAUACCGCUACAUGC