ncRNA ID | novel_osa_miR2176 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr6:16106212-16106430 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849769;SRR5049788 |
Length | 24 |
Mature sequence(if miRNA) | 196 - AUGCAGCGGUAUGAAUGAAAUGAC - 219 |
Stem-loop(if miRNA) |
--   C              A                         C                   AAA     U   UGUUUUU   C  --   -       -UUUA  A   AUG AGCGGUAUGAAUGA AUGACCAUUCUACCCUUAUAUACCA AUGGAAAAGAAAGAAAAAA   GAAUA AAA       ACA GU  GUA UGAUCGU     GA U   ||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||   ||||| |||       ||| ||  ||| |||||||     ||   UAC UCGCCAUACUUACU UACUGGUGAGAUGGGAAUAUAUGGU UAUUUUUUCUUUCUUUUUU   UUUAU UUU       UGU CG  CGU GUUAGCA     CU U CG   A              C                         A                   GUG     C   -UUUUAU   C  GU   C       UUCAA  G |
Stem-loop sequence | AUGCAGCGGUAUGAAUGAAAUGACCAUUCUACCCUUAUAUACCACAUGGAAAAGAAAGAAAAAAAAAGAAUAUAAAUGUUUUUACACGUGUAUGAUCGUUUUAGAAUUGUCAACUUACGAUUGCUGCUGGCCUGUUAUUUUUUUCUAUUUGUGUUUUUUCUUUCUUUUUUAUAUGGUAUAUAAGGGUAGAGUGGUCAUCUCAUUCAUACCGCUACAUGC |