ncRNA ID | novel_osa_miR2174 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:5580902-5580968 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2098823;SRR2099436;SRR1556014;SRR4407953;SRR4407954;SRR4407955;SRR4407960 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUAGUUUUGUGAGAAUGGAGACA - 24 |
Stem-loop(if miRNA) |
--                                  UCUCCAUUCUCACAAAACUACAUGUUUUAGCA   |||||||||||||||||||||||||||||||U   AGAGGUAAGAGUGUUUUGAUGUGUAAAAUUGU AC                                |
Stem-loop sequence | UCUCCAUUCUCACAAAACUACAUGUUUUAGCAUUGUUAAAAUGUGUAGUUUUGUGAGAAUGGAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK066750.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013074O22, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK318562.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J075190F14, full insert sequence | NA | coding protein | psRNATarget |