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BaseInfo

ncRNA ID novel_osa_miR2174
Species Oryza sativa
Class miRNA
Genome position Chr12:5580902-5580968 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR2098823;SRR2099436;SRR1556014;SRR4407953;SRR4407954;SRR4407955;SRR4407960
Length 24
Mature sequence(if miRNA) 1 - UGUAGUUUUGUGAGAAUGGAGACA - 24
Stem-loop(if miRNA) --                               
  UCUCCAUUCUCACAAAACUACAUGUUUUAGCA
  |||||||||||||||||||||||||||||||U
  AGAGGUAAGAGUGUUUUGAUGUGUAAAAUUGU
AC                               
Stem-loop sequence UCUCCAUUCUCACAAAACUACAUGUUUUAGCAUUGUUAAAAUGUGUAGUUUUGUGAGAAUGGAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK066750.1
ncRNA:24   ACAGAGGUAAGAGUGUUUUGAUGU   1
  ****||||||*|||||||||||=|
targets:1017   ACAGUCCAUUAUCACAAAACUAUA   1040

2.5 Oryza sativa Japonica Group cDNA clone:J013074O22, full insert sequence NA coding protein psRNATarget
AK318562.1
ncRNA:24   ACAGAGGUAAGAGUGUUUUGAUGU   1
  |||-||||**=|||||||||||||
targets:1630   UGU-UCCAACUUCACAAAACUACA   1652

3.0 Oryza sativa Japonica Group cDNA, clone: J075190F14, full insert sequence NA coding protein psRNATarget