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BaseInfo

ncRNA ID	novel_osa_miR2161
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:31249244-31249336 [-]
Reference genome	IRGSP-1.0
Source	SRR1849769
Length	24
Mature sequence(if miRNA)	1 - AUUAAUAUAUCUCGUUAGAUUCGU - 24
Stem-loop(if miRNA)	--                              A  -----G    AUUA   GAAUCUAACGAGGUAUAUUAAUCUAUGAUU GC      GAUG    C   |||||||||||||||||||||||||||||| ||      ||||   CUUAGAUUGCUCUAUAUAAUUAGGUACUAA CG      CUAC    U UG                              A  AUGUCA    GUUG
Stem-loop sequence	GAAUCUAACGAGGUAUAUUAAUCUAUGAUUAGCGGAUGAUUACUGUUGCAUCACUGUAGCAAAUCAUGGAUUAAUAUAUCUCGUUAGAUUCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015762321.1	ncRNA:24   UGCUUAGAUUGCUCUAUAUAAUUA   1   |||||||||||||||||||||||| targets:997   ACGAAUCUAACGAGAUAUAUUAAU   1020 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group transcription initiation factor TFIID subunit 13 (LOC9268703), mRNA	transcription initiation factor TFIID subunit 13(LOC9268703)	coding protein	psRNATarget
XM_015791997.1	ncRNA:24   UGCUUAGAUUGCUCUAUAUAAUUA   1   ||*|||||||||||=||||||||| targets:325   ACAAAUCUAACGAGGUAUAUUAAU   348 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276073 (LOC107276073), transcript variant X2, mRNA	uncharacterized LOC107276073(LOC107276073)	coding protein	psRNATarget
XM_015791996.1	ncRNA:24   UGCUUAGAUUGCUCUAUAUAAUUA   1   ||*|||||||||||=||||||||| targets:325   ACAAAUCUAACGAGGUAUAUUAAU   348 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276073 (LOC107276073), transcript variant X1, mRNA	uncharacterized LOC107276073(LOC107276073)	coding protein	psRNATarget