| ncRNA ID | ath-miR863-3p |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr4:7846597-7846899 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 239 - UUGAGAGCAACAAGACAUAAU - 259 |
| Stem-loop(if miRNA) |
AUAAG GGGG C A A A C A U GAA AACA --- A CUC AUGUAGAAACUAGAGAAGAGUUU GAAAACUCUUU UUAUGUCUUGUUG UCUCAAU GCAUUG UA AAUGUAUAUAUAUGCAAUUUAGA UAUGUUUU CCUAAUUUGAAUAA AUAGAUA UGAAUA AGUAU U ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||| || ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||| ||||| GAG UACAUCUUUGAUCUUUUUUCAAA CUUUUGAGAAA AAUACAGAACAAC AGAGUUA CGUAAC AU UUGUAUAUAUAUAUGUUGGAUCU AUACAAAG GGAUUAAACUUAUU UAUUUAU AUUUAU UUAUA A GAGAA --AG U G G C A A U --- -AAG CCU U |
| Stem-loop sequence | CUCAUAAGAUGUAGAAACUAGAGAAGAGUUUGGGGGAAAACUCUUUCUUAUGUCUUGUUGAUCUCAAUAGCAUUGAUACAAUGUAUAUAUAUGCAAUUUAGAAUAUGUUUUUCCUAAUUUGAAUAAGAAAUAGAUAAACAUGAAUAAGUAUAUAUAUAUUUCCUAUUUAGAAUAUUUAUUUAUUCAAAUUAGGUGAAACAUAAUCUAGGUUGUAUAUAUAUAUGUUAUACCAAUGCGAUUGAGAGCAACAAGACAUAAUAAAGAGUUUUCGAAAACUUUUUUCUAGUUUCUACAUAAGAGGAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK221370.1 |
|
1.5 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-35-C19 | NA | coding protein | psRNATarget |
| 1 | PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007). |