Search result

BaseInfo

ncRNA ID	novel_osa_miR2138
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:25224368-25224436 [+]
Reference genome	IRGSP-1.0
Source	SRR1849769;SRR1849771
Length	24
Mature sequence(if miRNA)	1 - AAUAUAUUGUAAUCUAGGAUGGGU - 24
Stem-loop(if miRNA)	--                           AUC  AU   AAUAUAUUGUAAUCUAGGAUGGGUCUA   CC  U   |||||||||||||||||||||||||||   ||   UUAUAUAACAUUAGAUCCUACCCAGGU   GG  U GG                           ---  AU
Stem-loop sequence	AAUAUAUUGUAAUCUAGGAUGGGUCUAAUCCCAUUUUAGGUGGACCCAUCCUAGAUUACAAUAUAUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015792172.1	ncRNA:24   UGGGUAGGAUCUAAUGUUAUAUAA   1   |===|*|||*|||||||||||||* targets:1846   AUUUACCCUUGAUUACAAUAUAUG   1869 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group probable cytochrome P450 313a3 (LOC4344089), mRNA	probable cytochrome P450 313a3(LOC4344089)	coding protein	psRNATarget
AK121053.1	ncRNA:24   UGGGUAGGAUCUAAUGUUAUAUAA   1   |===|*|||*|||||||||||||* targets:1804   AUUUACCCUUGAUUACAAUAUAUG   1827 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023055N06, full insert sequence	NA	coding protein	psRNATarget