ncRNA ID | novel_osa_miR2136 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:10012842-10012944 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAACUUGGUCAAACAUUCAAA - 21 |
Stem-loop(if miRNA) |
--    A            G   C              CACUUG    ACU   UGAA GUUUGACCAAGU UAU GAAAAAUAUAGCAA      UAGC   A   |||| |||||||||||| ||| ||||||||||||||      ||||   A   ACUU CAAACUGGUUCA AUA CUUUUUAUAUCGUU      GUUG   A AA    A            A   C              AUAAAA    ACU |
Stem-loop sequence | UGAAAGUUUGACCAAGUGUAUCGAAAAAUAUAGCAACACUUGUAGCACUAAAUCAGUUGAAAAUAUUGCUAUAUUUUUCCAUAAACUUGGUCAAACAUUCAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK119265.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:001-130-A05, full insert sequence | NA | coding protein | psRNATarget |