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BaseInfo

ncRNA ID novel_osa_miR2136
Species Oryza sativa
Class miRNA
Genome position Chr12:10012842-10012944 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014
Length 21
Mature sequence(if miRNA) 1 - AAACUUGGUCAAACAUUCAAA - 21
Stem-loop(if miRNA) --    A            G   C              CACUUG    ACU
  UGAA GUUUGACCAAGU UAU GAAAAAUAUAGCAA      UAGC   A
  |||| |||||||||||| ||| ||||||||||||||      ||||   A
  ACUU CAAACUGGUUCA AUA CUUUUUAUAUCGUU      GUUG   A
AA    A            A   C              AUAAAA    ACU
Stem-loop sequence UGAAAGUUUGACCAAGUGUAUCGAAAAAUAUAGCAACACUUGUAGCACUAAAUCAGUUGAAAAUAUUGCUAUAUUUUUCCAUAAACUUGGUCAAACAUUCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119265.1
ncRNA:21   AAACUUACAAACUGGUUCAAA   1
  |||*||*||||||||||||||
targets:488   UUUUAAAGUUUGACCAAGUUU   508

2.0 Oryza sativa Japonica Group cDNA clone:001-130-A05, full insert sequence NA coding protein psRNATarget