ncRNA ID | novel_osa_miR2132 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:36715447-36715548 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849768 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUGUCCCGGUUGGUGUUACC - 21 |
Stem-loop(if miRNA) |
--UUU             U                     C C A     U      GUCCCGGUUGGUG UACCAACCGGGGCUAAAGAUC C G GAUCU U      ||||||||||||| ||||||||||||||||||||| | | |||||      CAGGGCCAACCAU AUGGUUGGCCCUGAUUUCUAG G C CUAGA A GAAGU             U                     A C C     A |
Stem-loop sequence | UUUGUCCCGGUUGGUGUUACCAACCGGGGCUAAAGAUCCCCGAGAUCUUUAAAGAUCCCCGAGAUCUUUAGUCCCGGUUGGUAUUACCAACCGGGACUGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288438.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288734.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence | NA | coding protein | psRNATarget |