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BaseInfo

ncRNA ID novel_osa_miR2132
Species Oryza sativa
Class miRNA
Genome position Chr1:36715447-36715548 [+]
Reference genome IRGSP-1.0
Source SRR1849768
Length 21
Mature sequence(if miRNA) 1 - UUUGUCCCGGUUGGUGUUACC - 21
Stem-loop(if miRNA) --UUU             U                     C C A     U
     GUCCCGGUUGGUG UACCAACCGGGGCUAAAGAUC C G GAUCU U
     ||||||||||||| ||||||||||||||||||||| | | |||||
     CAGGGCCAACCAU AUGGUUGGCCCUGAUUUCUAG G C CUAGA A
GAAGU             U                     A C C     A
Stem-loop sequence UUUGUCCCGGUUGGUGUUACCAACCGGGGCUAAAGAUCCCCGAGAUCUUUAAAGAUCCCCGAGAUCUUUAGUCCCGGUUGGUAUUACCAACCGGGACUGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288438.1
ncRNA:21   CCAUUGUGGUUGGCCCUG-UUU   1
  ||||||||||||||||||-|||
targets:1328   GGUAACACCAACCGGGACUAAA   1349

3.0 Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence NA coding protein psRNATarget
AK288734.1
ncRNA:21   CCAUUGUGGUUGGCCCUG-UUU   1
  ||||||||||||||||||-|||
targets:64   GGUAACACCAACCGGGACUAAA   85

3.0 Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence NA coding protein psRNATarget