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BaseInfo

ncRNA ID	novel_osa_miR2131
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:21991207-21991388 [-]
Reference genome	IRGSP-1.0
Source	SRR1849768;SRR1849772;SRR2040384;SRR2040388;SRR2040391;SRR2040399;SRR2857728;SRR2857731;SRR2857735;SRR2857736;SRR3123650;SRR1738211;SRR1738217;SRR1738222;SRR1738237;SRR1738239
Length	24
Mature sequence(if miRNA)	1 - AAACGUUGUAAGUAAAAACUCAAA - 24
Stem-loop(if miRNA)	--UC                     GC                 UUU       C    CUAAAAAACGAAAAG     UUUAAAGA   G  G     AGUUUUUGCUUGUAACGUUUG  CACUCGUCUUAUUUAAU   UUUUUUG AAAU               UUGUG        ACU UA A     |||||||||||||||||||||  |||||||||||||||||   ||||||| ||||               |||||        ||| || U     UCAAAAAUGAAUGUUGCAAAC  GUGAGCAGAAUAAGUUA   AAAAGAC UUUA               AACAC        UGA AU A AAAC                     UA                 --U       -    AUAAUUAAUAAAAUA     ----UGAA   A  A
Stem-loop sequence	UCAGUUUUUGCUUGUAACGUUUGGCCACUCGUCUUAUUUAAUUUUUUUUUUGCAAAUCUAAAAAACGAAAAGUUGUGUUUAAAGAACUGUAGAUAAUAAAGUAAGUCACAAAUAAAAUAAUUAAUAAUUUCAGAAAAUAUUGAAUAAGACGAGUGAUCAAACGUUGUAAGUAAAAACUCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289013.1	ncRNA:24   AAACUCAAAAAUGAAUGUUGCAAA   1   |||||||||||||||=|||||||| targets:3847   UUUGAGUUUUUACUUGCAACGUUU   3870 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090089J03, full insert sequence	NA	coding protein	psRNATarget
AK288920.1	ncRNA:24   AAACUCAAAAAUGAAUGUUGCAAA   1   |||||||||||||||=|||||||| targets:3902   UUUGAGUUUUUACUUGCAACGUUU   3925 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090081L22, full insert sequence	NA	coding protein	psRNATarget
XM_015763075.1	ncRNA:24   AAACUCAAAAAUGAAUGUUGCAAA   1   |||||||||||=|||||||||||| targets:2835   UUUGAGUUUUUGCUUACAACGUUU   2858 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein trichome birefringence-like 28 (LOC4327430), transcript variant X3, mRNA	protein trichome birefringence-like 28(LOC4327430)	coding protein	psRNATarget
AK288652.1	ncRNA:24   AAACUCAAAAAUGAAUGUUGCAAA   1   |||||*||||||||||||||*||| targets:1195   UUUGAAUUUUUACUUACAACAUUU   1218 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090056N01, full insert sequence	NA	coding protein	psRNATarget