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BaseInfo

ncRNA ID	novel_osa_miR2129
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:18904908-18905070 [+]
Reference genome	IRGSP-1.0
Source	SRR1849768
Length	24
Mature sequence(if miRNA)	140 - AACUUUACAUCCCUGAAUCUAAAC - 163
Stem-loop(if miRNA)	--      C  AA            G                         --      CGCACAGGGUGUUUGGGCACUAA   UUAGAU CA  GAUGUGAAGUUU GGCGUGUCACAUCGGGUAUUAUAUA  UAGUGU                       U   |||||| ||  |||||||||||| |||||||||||||||||||||||||  ||||||                       A   AAUCUA GU  CUACAUUUCAAA CCGCACAGUGUAGCUCAUAAUAUAU  AAUAGC                       A CA      A  CC            A                         CG      AUAUCCUAGUUAUUAAUCAUAAA
Stem-loop sequence	UUAGAUCCAAAGAUGUGAAGUUUGGGCGUGUCACAUCGGGUAUUAUAUAUAGUGUCGCACAGGGUGUUUGGGCACUAAUAAAAAUACUAAUUAUUGAUCCUAUACGAUAAGCUAUAUAAUACUCGAUGUGACACGCCAAAACUUUACAUCCCUGAAUCUAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015756352.1	ncRNA:24   CAAAUCUAAGUCCCUACAUUUCAA   1   ||||||||||||||=||||||||| targets:2535   GUUUAGAUUCAGGGGUGUAAAGUU   2558 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group F-box/FBD/LRR-repeat protein At1g16930 (LOC4325380), mRNA	F-box/FBD/LRR-repeat protein At1g16930(LOC4325380)	coding protein	psRNATarget
AK072161.1	ncRNA:24   CAAAUCUAAGUCCCUACAUUUCAA   1   ||||||||||||||=||||||||| targets:917   GUUUAGAUUCAGGGGUGUAAAGUU   940 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013132P06, full insert sequence	NA	coding protein	psRNATarget
XM_015788745.1	ncRNA:24   CAAAUCUAAGUCCCUACAUUUCAA   1   ||||||||||||||=||||||||| targets:3225   GUUUAGAUUCAGGGGUGUAAAGUU   3248 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein O-glucosyltransferase 1 (LOC4340161), mRNA	protein O-glucosyltransferase 1(LOC4340161)	coding protein	psRNATarget
AK288540.1	ncRNA:24   CA--AAUCUAAGUCCCUACAUUUCAA   1   ||--||||||||||||=||||||||| targets:1535   GUGCUUAGAUUCAGGGGUGUAAAGUU   1560 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090045N03, full insert sequence	NA	coding protein	psRNATarget
AK288647.1	ncRNA:24   CAAAUCUAAGUCCCUACAUUUCAA   1   ||||||||*=|||||||||||||| targets:1896   GUUUAGAUCUAGGGAUGUAAAGUU   1919 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090056K16, full insert sequence	NA	coding protein	psRNATarget