Search result

BaseInfo

ncRNA ID	novel_osa_miR2125
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:26591069-26591242 [-]
Reference genome	IRGSP-1.0
Source	SRR1849768
Length	23
Mature sequence(if miRNA)	152 - AAAACAAACGUUGGAUCGAGAAA - 174
Stem-loop(if miRNA)	--     A AC                               A          AUA                C   UAAA    UAA   AAAAC A  GUUGGAUCGAGAAAUAGACGUCCGAGAUUCG CCACGUCACC   AGUUAAAAUUUAACUC CGG    AUUU   C   ||||| |  ||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||| |||    ||||   UUUUG U  CAACCUAGCUCUUUAUCUGCAGGCUCUAAGC GGUGCAGUGG   UCAAUUUUAAAUUGAG GUC    UGAG   U AU     A GA                               A          CAC                C   UAAG    UAC
Stem-loop sequence	AAAACAAACGUUGGAUCGAGAAAUAGACGUCCGAGAUUCGACCACGUCACCAUAAGUUAAAAUUUAACUCCCGGUAAAAUUUUAACUCAUGAGUGAAUCUGCGAGUUAAAUUUUAACUCACGGUGACGUGGACGAAUCUCGGACGUCUAUUUCUCGAUCCAACAGUAGUUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288075.1	ncRNA:23   AAAGAGCUAGGUUGCAAACAAAA   1   *||=|*||||||||||*|||||| targets:418   AUUUUGGAUCCAACGUAUGUUUU   440 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075162H16, full insert sequence	NA	coding protein	psRNATarget