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BaseInfo

ncRNA ID	novel_osa_miR2123
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:2314520-2314621 [-]
Reference genome	IRGSP-1.0
Source	SRR1849768
Length	24
Mature sequence(if miRNA)	79 - AUAGCGACACGGUCUCCAAAACAC - 102
Stem-loop(if miRNA)	--               C       C    GUCCUAAAACACGG   C   A   AUAGCGACACGGUCU CAAAACA AACU              UCU AUA A   ||||||||||||||| ||||||| ||||              ||| |||   UGUCGCUGUGCCAGA GUUUUGU UUGA              AGA UAU A CC               A       A    -AACUGAAGAACAA   -   G
Stem-loop sequence	AUAGCGACACGGUCUCCAAAACACAACUGUCCUAAAACACGGUCUCAUAAAAGUAUAGAAACAAGAAGUCAAAGUUAUGUUUUGAAGACCGUGUCGCUGUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015770513.1	ncRNA:24   CACAAAACCUCUGGCACAGCGAUA   1   |||||||||||||||||||||||| targets:53   GUGUUUUGGAGACCGUGUCGCUAU   76 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group cysteine-rich receptor-like protein kinase 10 (LOC4328709), transcript variant X13, mRNA	cysteine-rich receptor-like protein kinase 10(LOC4328709)	coding protein	psRNATarget
AK288575.1	ncRNA:24   CACAAAACCUCUGGCACAGCGAUA   1   ||||||||||||||||||||||=| targets:1949   GUGUUUUGGAGACCGUGUCGCUGU   1972 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090049A09, full insert sequence	NA	coding protein	psRNATarget
AK288987.1	ncRNA:24   CACAAAACCUCUGGCACAGCGAUA   1   |||||||*||||||||||=||||| targets:1302   GUGUUUUAGAGACCGUGUUGCUAU   1325 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090086J09, full insert sequence	NA	coding protein	psRNATarget
AK288230.1	ncRNA:24   CACAAAACCUCUGGCACAGCGAUA   1   ||*||||*||||||||||||||=| targets:5207   GUAUUUUAGAGACCGUGUCGCUGU   5230 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090012M14, full insert sequence	NA	coding protein	psRNATarget