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BaseInfo

ncRNA ID	novel_osa_miR2121
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:26192321-26192386 [+]
Reference genome	IRGSP-1.0
Source	SRR1849767;SRR2890846;SRR3123645;SRR5049784;SRR1738226
Length	24
Mature sequence(if miRNA)	43 - ACGAGGUUGGUUUAUUUUGGGACG - 66
Stem-loop(if miRNA)	--           -    A      ---    CAU   UCCCGAAAUAA CCAA CCUCGU   AGGA   G   ||||||||||| |||| ||||||   ||||   U   AGGGUUUUAUU GGUU GGAGCA   UCCU   C GC           U    -      UGA    ACA
Stem-loop sequence	UCCCGAAAUAACCAAACCUCGUAGGACAUGUCACAUCCUAGUACGAGGUUGGUUUAUUUUGGGACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015794280.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   *|||=|||||||||*||||||||| targets:886   GGUCUCAAAAUAAAACAACCUCGU   909 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group tricin synthase 2-like (LOC4345936), transcript variant X2, mRNA	tricin synthase 2-like(LOC4345936)	coding protein	psRNATarget
XM_015794281.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   *|||=|||||||||*||||||||| targets:976   GGUCUCAAAAUAAAACAACCUCGU   999 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group tricin synthase 2-like (LOC4345936), transcript variant X3, mRNA	tricin synthase 2-like(LOC4345936)	coding protein	psRNATarget
AK106735.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   *|||=|||||||||*||||||||| targets:1737   GGUCUCAAAAUAAAACAACCUCGU   1760 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-115-A04, full insert sequence	NA	coding protein	psRNATarget
AK288380.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   *|||=|||||||||*||||||||| targets:1839   GGUCUCAAAAUAAAACAACCUCGU   1862 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090026L13, full insert sequence	NA	coding protein	psRNATarget
XM_015794279.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   *|||=|||||||||*||||||||| targets:2170   GGUCUCAAAAUAAAACAACCUCGU   2193 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group tricin synthase 2-like (LOC4345936), transcript variant X1, mRNA	tricin synthase 2-like(LOC4345936)	coding protein	psRNATarget
AK111475.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   =*||||||||||||||||||||*| targets:1260   UAUCCCAAAAUAAACCAACCUCAU   1283 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-183-F05, full insert sequence	NA	coding protein	psRNATarget
AK119335.1	ncRNA:24   GCAGGGUUUUAUUUGGUUGGAGCA   1   =*||||||||||||||||||||*| targets:1090   UAUCCCAAAAUAAACCAACCUCAU   1113 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-131-C06, full insert sequence	NA	coding protein	psRNATarget