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BaseInfo

ncRNA ID	novel_osa_miR2116
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:19738798-19738933 [-]
Reference genome	IRGSP-1.0
Source	SRR1849767;SRR1738224
Length	24
Mature sequence(if miRNA)	113 - GUCUCUGAUCUCGCCGGGCACGAA - 136
Stem-loop(if miRNA)	--    C             CA  AAC            A           U      G C    U A   GUCU UGAUCUCGCCGGG  CG   UCGAGGAGGAAG CUACCCUGUUG CGACUG G GGUC G A   |||| |||||||||||||  ||   |||||||||||| ||||||||||| |||||| | |||| | G   CAGA ACUAGAGCGGCCU  GC   AGCUUCUCCUUC GAUGGGACAAC GCUGAU C UCAG C U GA    A             AC  CUA            C           C      G -    U U
Stem-loop sequence	GUCUCUGAUCUCGCCGGGCACGAACUCGAGGAGGAAGACUACCCUGUUGUCGACUGGGCGGUCUGAAGUUCUGACUCGUAGUCGCCAACAGGGUAGCCUUCCUCUUCGAAUCCGCAUCCGGCGAGAUCAAAGACAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121792.1	ncRNA:24   AAGCACGGGCCGCUCUAGUCUCUG   1   |*|||||||||||||||||||||= targets:1861   UCCGUGCCCGGCGAGAUCAGAGAU   1884 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J033095E18, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:24   AAGCACGGGCCGCUCUAGUCUCUG   1   |*|||||||||||||||||||||= targets:2532   UCCGUGCCCGGCGAGAUCAGAGAU   2555 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK110000.1	ncRNA:24   AAGCACGGGCCGCUCUAGUCUCUG   1   **|*||||||*||||||||*|||| targets:1193   GGCCUGCCCGACGAGAUCACAGAC   1216 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-159-F07, full insert sequence	NA	coding protein	psRNATarget