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BaseInfo

ncRNA ID novel_osa_miR2108
Species Oryza sativa
Class miRNA
Genome position Chr8:1745721-1745814 [+]
Reference genome IRGSP-1.0
Source SRR1849767
Length 22
Mature sequence(if miRNA) 73 - UACGAAUAUGAACAAUGCUAGA - 94
Stem-loop(if miRNA) --        CC  C         G             A     CAU
  UAGCAUUG  CA AUUCGUAUA AUGUUAAUGAAUC AGGCA   A
  ||||||||  || ||||||||| ||||||||||||| |||||
  AUCGUAAC  GU UAAGCAUAU UACAAUUACUUAG UCUGU   U
AG        AA  A         A             A     AUA
Stem-loop sequence UAGCAUUGCCCACAUUCGUAUAGAUGUUAAUGAAUCAAGGCACAUAUAUAUGUCUAGAUUCAUUAACAUAUAUACGAAUAUGAACAAUGCUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015775404.1
ncRNA:22   AGAUCGUAACAAGUAUAAGCAU   1
  |||||||||||||||||||*|*
targets:3338   UCUAGCAUUGUUCAUAUUCAUU   3359

2.5 PREDICTED: Oryza sativa Japonica Group protein NETWORKED 1A (LOC4331702), transcript variant X1, mRNA protein NETWORKED 1A(LOC4331702) coding protein psRNATarget
XM_015775405.1
ncRNA:22   AGAUCGUAACAAGUAUAAGCAU   1
  |||||||||||||||||||*|*
targets:3338   UCUAGCAUUGUUCAUAUUCAUU   3359

2.5 PREDICTED: Oryza sativa Japonica Group protein NETWORKED 1A (LOC4331702), transcript variant X2, mRNA protein NETWORKED 1A(LOC4331702) coding protein psRNATarget