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BaseInfo

ncRNA ID	novel_osa_miR2096
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:11453459-11453556 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555749;SRR1556011;SRR1556014;SRR4407953;SRR4407957;SRR1556016
Length	24
Mature sequence(if miRNA)	75 - CUUUAAUAUAUUAUAGGUGUCGGU - 98
Stem-loop(if miRNA)	--      UAU                     -      -     AAAAU   CUUUAA   AUUAUAGGUGUCGGUUUUAAA AAAAAC GACAC     A   ||||||   ||||||||||||||||||||| |||||| |||||   GAAAUU   UAAUAUCCACAGUCAAGGUUU UUUUUG UUGUG     U UG      CAU                     A      G     AAUAA
Stem-loop sequence	CUUUAAUAUAUUAUAGGUGUCGGUUUUAAAAAAAACGACACAAAAUAUAAUAAGUGUUGGUUUUUAUUUGGAACUGACACCUAUAAUUACUUAAAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK070414.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   |||||||||||||||||||||*|| targets:1140   ACCGACACCUAUAAUAUAUUACAG   1163 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023053H09, full insert sequence	NA	coding protein	psRNATarget
AK070414.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   ||||=|||=||||||||||||*|| targets:1099   ACCGGCACUUAUAAUAUAUUAUAG   1122 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023053H09, full insert sequence	NA	coding protein	psRNATarget
AB510478.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   |||*|=||=||||||||||||||| targets:251   ACCUAUACUUAUAAUAUAUUAAAG   274 Target Full Sequence	2.0	Oryza sativa Indica Group Snorkel 1 gene for Ethylene response factor, complete cds, cultivar: C9285	NA	coding protein	psRNATarget
XM_015773630.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   |||*|||=|||||||||||||*|| targets:1598   ACCAACAUCUAUAAUAUAUUAUAG   1621 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group GDSL esterase/lipase At1g28650-like (LOC107278316), mRNA	GDSL esterase/lipase At1g28650-like(LOC107278316)	coding protein	psRNATarget
AK288922.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   |||*|||=|||||||||||||*|| targets:1073   ACCAACAUCUAUAAUAUAUUAUAG   1096 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090081M23, full insert sequence	NA	coding protein	psRNATarget
XM_015773629.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   |||*|||=|||||||||||||*|| targets:878   ACCAACAUCUAUAAUAUAUUAUAG   901 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group GDSL esterase/lipase At1g28650 (LOC4332910), mRNA	GDSL esterase/lipase At1g28650(LOC4332910)	coding protein	psRNATarget
AK069235.1	ncRNA:24   UGGCUGUGGAUAUUAUAUAAUUUC   1   ||=|=*|||||||||||||||*|| targets:3419   ACUGGGACCUAUAAUAUAUUAUAG   3442 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023010D04, full insert sequence	NA	coding protein	psRNATarget