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BaseInfo

ncRNA ID novel_osa_miR2095
Species Oryza sativa
Class miRNA
Genome position Chr3:5624533-5624588 [-]
Reference genome IRGSP-1.0
Source SRR1849767;SRR1849771;SRR1849772;SRR2040384;SRR2040385;SRR2040388;SRR2040394;SRR2040396;SRR2040397;SRR2040402;SRR2040405;SRR2040406;SRR2040407;SRR2040408;SRR3123650;SRR5049793;SRR1738210;SRR1738239
Length 24
Mature sequence(if miRNA) 33 - AUGAAUGUUAACGAACCUAGGCAC - 56
Stem-loop(if miRNA) --   A       C   C    GC CAC
  AUG AUGUUAA GAA CUAG  A   A
  ||| ||||||| ||| ||||  |
  UAU UAUAAUU CUU GAUC  U   U
UA   A       A   A    UA AUA
Stem-loop sequence AUGAAUGUUAACGAACCUAGGCACACAUAUAUAUCUAGAUUCAUUAAUAUAUAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015777143.1
ncRNA:24   CACGGAUCCAAGCAAUUGUAAGUA   1
  *|*==|||*||||||||||||*||
targets:1960   CUAUUUAGAUUCGUUAACAUUAAU   1983

2.5 PREDICTED: Oryza sativa Japonica Group lecithin-cholesterol acyltransferase-like 1 (LOC4333995), mRNA lecithin-cholesterol acyltransferase-like 1(LOC4333995) coding protein psRNATarget
AK071679.1
ncRNA:24   CACGGAUCCAAGCAAUUGUAAGUA   1
  *|*==|||*||||||||||||*||
targets:1844   CUAUUUAGAUUCGUUAACAUUAAU   1867

2.5 Oryza sativa Japonica Group cDNA clone:J023108I08, full insert sequence NA coding protein psRNATarget