ncRNA ID | novel_osa_miR2095 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:5624533-5624588 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849767;SRR1849771;SRR1849772;SRR2040384;SRR2040385;SRR2040388;SRR2040394;SRR2040396;SRR2040397;SRR2040402;SRR2040405;SRR2040406;SRR2040407;SRR2040408;SRR3123650;SRR5049793;SRR1738210;SRR1738239 |
Length | 24 |
Mature sequence(if miRNA) | 33 - AUGAAUGUUAACGAACCUAGGCAC - 56 |
Stem-loop(if miRNA) |
--   A       C   C    GC CAC   AUG AUGUUAA GAA CUAG  A   A   ||| ||||||| ||| ||||  |   UAU UAUAAUU CUU GAUC  U   U UA   A       A   A    UA AUA |
Stem-loop sequence | AUGAAUGUUAACGAACCUAGGCACACAUAUAUAUCUAGAUUCAUUAAUAUAUAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015777143.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group lecithin-cholesterol acyltransferase-like 1 (LOC4333995), mRNA | lecithin-cholesterol acyltransferase-like 1(LOC4333995) | coding protein | psRNATarget | |||||||||
AK071679.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023108I08, full insert sequence | NA | coding protein | psRNATarget |