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BaseInfo

ncRNA ID	novel_osa_miR2092
Species	Oryza sativa
Class	miRNA
Genome position	Chr3:21191611-21191714 [+]
Reference genome	IRGSP-1.0
Source	SRR1849767;SRR1849769;SRR1849770;SRR1849773;SRR2040395;SRR2857728;SRR3123645;SRR3123646;SRR3123651;SRR3234040;SRR3234045;SRR5049781;SRR5351738;SRR1609313;SRR1738226;SRR1738228;SRR1738240
Length	21
Mature sequence(if miRNA)	84 - UUGAGCCGCGUCAAUAUCUCU - 104
Stem-loop(if miRNA)	--             C          -           AUUACAG  AC  C  C   AGGUAUUGGCGUG CUCAAUCCGA AGGCAUGGCUG       GC  CU GA C   ||||||||||||| |||||||||| |||||||||||       ||  || ||   UCUAUAACUGCGC GAGUUAGGUU UUUGUACCGAC       CG  GA CU G UC             C          C           ----GUA  -C  U  A
Stem-loop sequence	AGGUAUUGGCGUGCCUCAAUCCGAAGGCAUGGCUGAUUACAGGCACCUCGACCGAUCUAGCGCAUGCAGCCAUGUUUCUUGGAUUGAGCCGCGUCAAUAUCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK066248.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:903   AGAGAUAUUGGCGCGGCUCAA   923 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013055O11, full insert sequence	NA	coding protein	psRNATarget
AK120317.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:903   AGAGAUAUUGGCGCGGCUCAA   923 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013055O12, full insert sequence	NA	coding protein	psRNATarget
AK100757.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:1321   AGAGAUAUUGGCGCGGCUCAA   1341 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023118P13, full insert sequence	NA	coding protein	psRNATarget
AK072900.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:1348   AGAGAUAUUGGCGCGGCUCAA   1368 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023145A02, full insert sequence	NA	coding protein	psRNATarget
XM_015781657.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:1473   AGAGAUAUUGGCGCGGCUCAA   1493 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group scarecrow-like protein 27 (LOC4336617), mRNA	scarecrow-like protein 27(LOC4336617)	coding protein	psRNATarget
XM_015771930.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:1372   AGAGAUAUUGGCGCGGCUCAA   1392 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group scarecrow-like protein 6 (LOC4330230), transcript variant X2, mRNA	scarecrow-like protein 6(LOC4330230)	coding protein	psRNATarget
XM_015771929.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   ||||||||||=|||||||||| targets:1372   AGAGAUAUUGGCGCGGCUCAA   1392 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group scarecrow-like protein 6 (LOC4330230), transcript variant X1, mRNA	scarecrow-like protein 6(LOC4330230)	coding protein	psRNATarget
JX310318.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   =|||||||||=|||||||||| targets:438   GGAGAUAUUGGCGCGGCUCAA   458 Target Full Sequence	1.5	Oryza sativa cultivar Dongjin scarecrow-like transcription factor GRAS1 (GRAS1) mRNA, complete cds	NA	coding protein	psRNATarget
AK106239.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   *|||||||||=|||||||||| targets:547   CGAGAUAUUGGCGCGGCUCAA   567 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-100-C09, full insert sequence	NA	coding protein	psRNATarget
AK101035.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   *|||||||||=|||||||||| targets:1524   CGAGAUAUUGGCGCGGCUCAA   1544 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023150P14, full insert sequence	NA	coding protein	psRNATarget
XM_015771585.1	ncRNA:21   UCUCUAUAACUGCGCCGAGUU   1   *|||||||||=|||||||||| targets:1521   CGAGAUAUUGGCGCGGCUCAA   1541 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group scarecrow-like protein 6 (LOC4330231), mRNA	scarecrow-like protein 6(LOC4330231)	coding protein	psRNATarget